RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 SSBP2P81877 361 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 TMEM267Q0VDI3 215 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 CBX3Q13185 183 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 ARL6IP1Q15041 203 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 SRSF7Q16629 238 aaKnown RBP eCLIP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 DEFB136Q30KP8 78 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 ACTBL2Q562R1 376 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 GLDNQ6ZMI3 551 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 Q6ZS49 121 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 LHFPL1Q86WI0 220 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 OR5H2Q8NGV7 314 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 OR4K15Q8NH41 348 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 OR1L1Q8NH94 360 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 DCUN1D4Q92564 292 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 DLX4Q92988 240 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 GALMQ96C23 342 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 FLYWCH2Q96CP2 140 aaKnown RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 RITA1Q96K30 269 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 DUX3Q96PT4 197 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 FYTTD1Q96QD9 318 aaKnown RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 PRR25Q96S07 402 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 PRRT1Q99946 306 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 CMSS1Q9BQ75 279 aaKnown RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 ST6GALNAC5Q9BVH7 336 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 MRPL20Q9BYC9 149 aaKnown RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 RANGRFQ9HD47 186 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 C12orf4Q9NQ89 552 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 OR2S2Q9NQN1 319 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 EHFQ9NZC4 300 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 GNG12Q9UBI6 72 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 SLC23A1Q9UHI7 598 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 ANXA10Q9UJ72 324 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 TRAPPC2LQ9UL33 140 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 RNF150Q9ULK6 438 aa3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 FOXA2Q9Y261 457 aaPredicted RBP3.4□□□□□ -1.87
TMEM106C-220ENST00000552561 IGHV3-43A0A0B4J1X8 118 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 IGKV1-6A0A0C4DH72 117 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 SMLR1H3BR10 107 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 HSPB1P04792 205 aaKnown RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 FRMD6-AS1P0C7T7 363 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 GSTT2P0CG29 244 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 IGHV3-43DP0DP04 118 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 CXCL3P19876 107 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 ZP3P21754 424 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 ZBTB25P24278 435 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 PPP1CCP36873 323 aaKnown RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 LGALS7P47929 136 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 EIF2B2P49770 351 aaKnown RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 NKX2-5P52952 324 aaPredicted RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 TAS2R46P59540 309 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 TAGLNQ01995 201 aaKnown RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 PPP1R1AQ13522 171 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 KLF5Q13887 457 aaPredicted RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 GNMTQ14749 295 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 CDK10Q15131 360 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 LTC4SQ16873 150 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 FAM209BQ5JX69 171 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 AADACL3Q5VUY0 350 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 TMEM65Q6PI78 240 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 IL34Q6ZMJ4 242 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 OVCH2Q7RTZ1 564 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 TMED4Q7Z7H5 227 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 PDPNQ86YL7 162 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 TCTE3Q8IZS6 198 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 ARRDC1Q8N5I2 433 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 ADAD2Q8NCV1 583 aaKnown RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 OR2AK2Q8NG84 335 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 OR5AP2Q8NGF4 316 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 OR52L2PQ8NGH6 319 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 OR2K2Q8NGT1 345 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 MARCH1Q8TCQ1 289 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 NEK7Q8TDX7 302 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 WDR89Q96FK6 387 aaPredicted RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 CABLES2Q9BTV7 478 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 MED28Q9H204 178 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 C5orf66Q9H5L9 145 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 CHMP1AQ9HD42 196 aaPredicted RBP3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 Q9N2K0 584 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 ING3Q9NXR8 418 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 KCNIP1Q9NZI2 227 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 SCP2D1Q9UJQ7 156 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 WASHC3Q9Y3C0 194 aa3.39□□□□□ -1.87
TMEM106C-220ENST00000552561 IGHV4OR15-8A0A075B7B6 117 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 A0A087WW49 117 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 TRBV9A0A0B4J1U6 114 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 A0A0G2JLM5 398 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 A0A1W2PN81 502 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 SNRPGP15A8MWD9 76 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 G3V3Q6 166 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 FCN1O00602 326 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 FABP7O15540 132 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 SSNA1O43805 119 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 IGLV2-23P01705 113 aa3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 HLA-AP01891 365 aaKnown RBP3.38□□□□□ -1.87
TMEM106C-220ENST00000552561 IFNA6P05013 189 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms