RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 OR2T35Q8NGX2 323 aa11.25□□□□□ -0.61
CACNB3-216ENST00000550391 OR5R1Q8NH85 324 aa11.25□□□□□ -0.61
CACNB3-216ENST00000550391 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
CACNB3-216ENST00000550391 RBM14Q96PK6 669 aaKnown RBP11.25□□□□□ -0.61
CACNB3-216ENST00000550391 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
CACNB3-216ENST00000550391 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
CACNB3-216ENST00000550391 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
CACNB3-216ENST00000550391 TCF19Q9Y242 345 aa11.25□□□□□ -0.61
CACNB3-216ENST00000550391 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
CACNB3-216ENST00000550391 BTBD17A6NE02 478 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 MED6O75586 246 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 OR2F2O95006 317 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 SCGB1D2O95969 90 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
CACNB3-216ENST00000550391 MAS1LP35410 378 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 RPL8P62917 257 aaKnown RBP11.24□□□□□ -0.61
CACNB3-216ENST00000550391 ID3Q02535 119 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 CD300CQ08708 224 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 RAB32Q13637 225 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 C5orf64Q2M2E5 130 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 MMD2Q8IY49 270 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 ZNF430Q9H8G1 570 aaPredicted RBP11.24□□□□□ -0.61
CACNB3-216ENST00000550391 TPSG1Q9NRR2 321 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 TMEM14BQ9NUH8 114 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 CDC42EP3Q9UKI2 254 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 POMT1Q9Y6A1 747 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 PKD1L1Q8TDX9 2849 aa11.24□□□□□ -0.61
CACNB3-216ENST00000550391 K7EPK0 472 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 ACTL6BO94805 426 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 MPC2O95563 127 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 IFNA17P01571 189 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 IGHV4-59P01825 116 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 RLN2P04090 185 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 PET100P0DJ07 73 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 S100A10P60903 97 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 SPCS3P61009 180 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 TNFRSF9Q07011 255 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 LY6EQ16553 131 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 KRTAP24-1Q3LI83 254 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 C16orf82Q7Z2V1 217 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 FAM71E2Q8N5Q1 922 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 Q8N9W7 124 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 SSMEM1Q8WWF3 244 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 ZNF257Q9Y2Q1 563 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 SVEP1Q4LDE5 3571 aa11.23□□□□□ -0.61
CACNB3-216ENST00000550391 TRAV14DV4A0A0A6YYC5 116 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 SMLR1H3BR10 107 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 WRBO00258 174 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 NXPH3O95157 252 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 SRD5A1P18405 259 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 TNCP24821 2201 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
CACNB3-216ENST00000550391 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
CACNB3-216ENST00000550391 PJVKQ0ZLH3 352 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
CACNB3-216ENST00000550391 Q5BKY6 102 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 RBMS3Q6XE24 437 aaKnown RBP11.22□□□□□ -0.61
CACNB3-216ENST00000550391 TMEM219Q86XT9 240 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 OR1L8Q8NGR8 309 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 THAP6Q8TBB0 222 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 PPP1R14BQ96C90 147 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 RASL11BQ9BPW5 248 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 COMMD5Q9GZQ3 224 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 MAGT1Q9H0U3 335 aa11.22□□□□□ -0.61
CACNB3-216ENST00000550391 LSM5Q9Y4Y9 91 aaKnown RBP11.22□□□□□ -0.61
CACNB3-216ENST00000550391 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.61
CACNB3-216ENST00000550391 G3V3Q6 166 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 M0QZK8 103 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 FCN1O00602 326 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 FGF16O43320 207 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 SYNGR2O43760 224 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 DEDDO75618 318 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 C1QBP02746 253 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 SLC25A4P12235 298 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 C11orf87Q6NUJ2 197 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 PRSS54Q6PEW0 395 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 RBKSQ9H477 322 aa11.21□□□□□ -0.61
CACNB3-216ENST00000550391 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.61
CACNB3-216ENST00000550391 MEGF8Q7Z7M0 2845 aa11.21□□□□□ -0.62
CACNB3-216ENST00000550391 CEBPZOSA8MTT3 80 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 H0YIZ8 118 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 L7N2F9 121 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-216ENST00000550391 CHST1O43916 411 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 SSSCA1O60232 199 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 CNIH1O95406 144 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms