RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 CIB3Q96Q77 187 aaPredicted RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 AGMATQ9BSE5 352 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 CLEC7AQ9BXN2 247 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 PARP12Q9H0J9 701 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 TMEM133Q9H2Q1 129 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 IFI27L2Q9H2X8 130 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 HEXA-AS1Q9H8Q6 139 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 COA4Q9NYJ1 87 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 ONECUT1Q9UBC0 465 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 UBQLN2Q9UHD9 624 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 SAA2-SAA4A0A096LPE2 208 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 BORCS7-ASMTA0A0B4J1R7 106 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 MPTX1A8MV57 137 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 NDUFA7O95182 113 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 KRASP01116 189 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 MBPP02686 304 aaPredicted RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 SAA2P0DJI9 122 aaPredicted RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 TPT1P13693 172 aaKnown RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 CXCL2P19875 107 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 RPL12P30050 165 aaKnown RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 MC5RP33032 325 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 CEACAM3P40198 252 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 BAXQ07812 192 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 IL15RAQ13261 267 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 EIF4EBP1Q13541 118 aaPredicted RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 DEFB112Q30KQ8 113 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF585BQ52M93 769 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 OR2B11Q5JQS5 317 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 KPRPQ5T749 579 aaPredicted RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 LAMTOR1Q6IAA8 161 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF841Q6ZN19 808 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 C1orf122Q6ZSJ8 110 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 TGIF2LXQ8IUE1 241 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF439Q8NDP4 499 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 BEND2Q8NDZ0 799 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 OR4A16Q8NH70 328 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 LRRC20Q8TCA0 184 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 R3HDM4Q96D70 268 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 PCGF1Q9BSM1 259 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 RNF126Q9BV68 326 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF471Q9BX82 626 aaPredicted RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 PLSCR3Q9NRY6 295 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 SLC35D1Q9NTN3 355 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 FKBP11Q9NYL4 201 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 CACNG5Q9UF02 275 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 RCL1Q9Y2P8 373 aaKnown RBP5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 KPTNQ9Y664 436 aa5.73□□□□□ -1.49
DEPDC4-208ENST00000549341 H7C2Y5 167 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 SLC31A2O15432 143 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 JTBO76095 146 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 S1PR2O95136 353 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 IGHV3-7P01780 117 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 GAPDHP04406 335 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 CAV2P51636 162 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF137PP52743 207 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 DLX6P56179 175 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 TAS2R30P59541 319 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 RPL30P62888 115 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 ID3Q02535 119 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF266Q14584 549 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 RPL39P5Q59GN2 51 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 NCR3LG1Q68D85 454 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 TEX261Q6UWH6 196 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF833PQ6ZTB9 187 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 STX12Q86Y82 276 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 PDPNQ86YL7 162 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 MRPL41Q8IXM3 137 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 OR2C3Q8N628 320 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 LY6G5BQ8NDX9 201 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 VSTM2AQ8TAG5 236 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 OSR1Q8TAX0 266 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 LEAP2Q969E1 77 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 PHYHIPLQ96FC7 376 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 GPHA2Q96T91 129 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 ENY2Q9NPA8 101 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 AURKAIP1Q9NWT8 199 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 OR5AC2Q9NZP5 309 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 INSIG2Q9Y5U4 225 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 U3KQ87 197 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 DNAH3Q8TD57 4116 aa5.72□□□□□ -1.49
DEPDC4-208ENST00000549341 IGHV2-26A0A0B4J1V2 119 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 A0A1W2PPE3 182 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 RNF222A6NCQ9 220 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 MARCH11A6NNE9 402 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 LINC00473A8K010 186 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 CEBPZOSA8MTT3 80 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 A8MXK9 166 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 LEUTXA8MZ59 168 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 H0YIZ8 118 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 SHOXO15266 292 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 SYNGR2O43760 224 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 CHST1O43916 411 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 SSSCA1O60232 199 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 PITX3O75364 302 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 MMP23AO75900 390 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 DFFBO76075 338 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 CRYZL1O95825 349 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 IFNA17P01571 189 aa5.71□□□□□ -1.5
DEPDC4-208ENST00000549341 IGKV1-5P01602 117 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms