RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ANXA3P12429 323 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 ARPC4P59998 168 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 TSPAN5P62079 268 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 SIGIRRQ6IA17 410 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 PRR18Q8N4B5 295 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 GVQW1Q8N7I0 195 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 OR5AP2Q8NGF4 316 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 OR52L2PQ8NGH6 319 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 TERB2Q8NHR7 220 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 ST6GALNAC5Q9BVH7 336 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 IZUMO1RA6ND01 250 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 OR5H14A6NHG9 310 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 MC5RP33032 325 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 PPP1CCP36873 323 aaKnown RBP10.24□□□□□ -0.77
CDX2-202ENST00000548877 SURF2Q15527 256 aaPredicted RBP10.24□□□□□ -0.77
CDX2-202ENST00000548877 C4orf46Q504U0 113 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 Q6ZS49 121 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 OR5AN1Q8NGI8 311 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 DDB2Q92466 427 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 FAM103A1Q9BTL3 118 aaKnown RBP10.24□□□□□ -0.77
CDX2-202ENST00000548877 FAAP24Q9BTP7 215 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 IFI27L2Q9H2X8 130 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 PIPOXQ9P0Z9 390 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 AK3Q9UIJ7 227 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 MGAT4AQ9UM21 535 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 FLVCR2Q9UPI3 526 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 RYR1P21817 5038 aa10.24□□□□□ -0.77
CDX2-202ENST00000548877 C13orf42A0A1B0GVH6 325 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 LY6G6CO95867 125 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 PMP2P02689 132 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 FCGR3AP08637 254 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 SULT1A3P0DMM9 295 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 SULT1A4P0DMN0 295 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 CT45A6P0DMU7 189 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 CT45A5P0DMU8 189 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 CT45A7P0DMV0 189 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 ANXA7P20073 488 aaKnown RBP10.23□□□□□ -0.77
CDX2-202ENST00000548877 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 PLGLAQ15195 96 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 ZNF343Q6P1L6 599 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 MRPL30Q8TCC3 161 aaKnown RBP10.23□□□□□ -0.77
CDX2-202ENST00000548877 ZNF431Q8TF32 576 aaPredicted RBP10.23□□□□□ -0.77
CDX2-202ENST00000548877 ABHD5Q8WTS1 349 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 SULT4A1Q9BR01 284 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 PLEKHA3Q9HB20 300 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 KCNIP1Q9NZI2 227 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 ANXA10Q9UJ72 324 aa10.23□□□□□ -0.77
CDX2-202ENST00000548877 TRBV6-6A0A0A6YYG2 114 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 H0YJW9 148 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 RAB29O14966 203 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 OR2A4O95047 310 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 SPDEFO95238 335 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 C1QBP02746 253 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 CTXN2P0C2S0 81 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 GSTT2P0CG29 244 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 AADACP22760 399 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 PSG5Q15238 335 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 FCN2Q15485 313 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 MOB1BQ7L9L4 216 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 NOXA1Q86UR1 476 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 SLC25A42Q86VD7 318 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 OR2AK2Q8NG84 335 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 OR13C8Q8NGS7 320 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 GALMQ96C23 342 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 CHMP1AQ9HD42 196 aaPredicted RBP10.22□□□□□ -0.77
CDX2-202ENST00000548877 PEF1Q9UBV8 284 aaKnown RBP10.22□□□□□ -0.77
CDX2-202ENST00000548877 WASHC3Q9Y3C0 194 aa10.22□□□□□ -0.77
CDX2-202ENST00000548877 ANKRD34BA5PLL1 514 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 ZNF785A8K8V0 405 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 ITGB1BP1O14713 200 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 CNIH1O95406 144 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 CA2P00918 260 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 OR4E1P0C645 316 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 CD81P60033 236 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 CD300CQ08708 224 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 HMGN3Q15651 99 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 LPCAT3Q6P1A2 487 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 C5orf24Q7Z6I8 188 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 ZFAND1Q8TCF1 268 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 HYLS1Q96M11 299 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 TMEM68Q96MH6 324 aa10.21□□□□□ -0.77
CDX2-202ENST00000548877 METTL1Q9UBP6 276 aaKnown RBP10.21□□□□□ -0.77
CDX2-202ENST00000548877 KIAA1109Q2LD37 5005 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 GIPP09681 153 aaPredicted RBP10.2□□□□□ -0.78
CDX2-202ENST00000548877 SSBP2P81877 361 aaPredicted RBP10.2□□□□□ -0.78
CDX2-202ENST00000548877 TMEM128Q5BJH2 165 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 LHFPL1Q86WI0 220 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
CDX2-202ENST00000548877 USMG5Q96IX5 58 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 PHB2Q99623 299 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 SEC22CQ9BRL7 303 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 AGMATQ9BSE5 352 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 ZNF436Q9C0F3 470 aaPredicted RBP10.2□□□□□ -0.78
CDX2-202ENST00000548877 PEMTQ9UBM1 199 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 SLC23A1Q9UHI7 598 aa10.2□□□□□ -0.78
CDX2-202ENST00000548877 ZNF230Q9UIE0 474 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms