RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 NAV3Q8IVL0 2385 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 DMXL1Q9Y485 3027 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 LRP4O75096 1905 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 IGFBP2P18065 325 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 ARR3P36575 388 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 FOXL2NBQ6ZUU3 175 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 TRIB1Q96RU8 372 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 STRADBQ9C0K7 418 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 FBXL7Q9UJT9 491 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 SPRY3O43610 288 aa12.65□□□□□ -0.38
BRF1-211ENST00000547530 MRPL49Q13405 166 aaKnown RBP12.65□□□□□ -0.38
BRF1-211ENST00000547530 LRRC29Q8WV35 223 aa12.65□□□□□ -0.38
BRF1-211ENST00000547530 SRP14P37108 136 aaKnown RBP12.65□□□□□ -0.38
BRF1-211ENST00000547530 IL11RAQ14626 422 aa12.65□□□□□ -0.38
BRF1-211ENST00000547530 Q6P435 159 aa12.65□□□□□ -0.38
BRF1-211ENST00000547530 ZNF645Q8N7E2 425 aa12.65□□□□□ -0.38
BRF1-211ENST00000547530 SLC24A4Q8NFF2 622 aa12.65□□□□□ -0.38
BRF1-211ENST00000547530 HELTA6NFD8 242 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 OR5B21A6NL26 309 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 DNASE2BQ8WZ79 361 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 TECTBQ96PL2 329 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 MPC1Q9Y5U8 109 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
BRF1-211ENST00000547530 PCNX2A6NKB5 2137 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
BRF1-211ENST00000547530 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 OR5G3P0C626 314 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 C6orf15Q6UXA7 325 aaPredicted RBP12.64□□□□□ -0.39
BRF1-211ENST00000547530 TGIF2LYQ8IUE0 185 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 S1PR3Q99500 378 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 TRAV5A0A0B4J249 113 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 C20orf202A1L168 122 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 GGCTO75223 188 aaKnown RBP12.64□□□□□ -0.39
BRF1-211ENST00000547530 HSBP1O75506 76 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 MEOX1P50221 254 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 RPP30P78346 268 aaKnown RBP12.64□□□□□ -0.39
BRF1-211ENST00000547530 RPEL1Q2QD12 228 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 ZNF497Q6ZNH5 498 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
BRF1-211ENST00000547530 A0A1W2PN81 502 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 FOXF2Q12947 444 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 TIGITQ495A1 244 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 STPG3Q8N7X2 389 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 NRN1Q9NPD7 142 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 ZNF355PQ9NSJ1 428 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 ABI3Q9P2A4 366 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 MFAP2P55001 183 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 CARFQ8N187 725 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 SLC35D1Q9NTN3 355 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 HSPB7Q9UBY9 170 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 TREML4Q6UXN2 200 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 STPG4Q8N801 248 aa12.63□□□□□ -0.39
BRF1-211ENST00000547530 K7EN84 100 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 PDE6DO43924 150 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 MGST2Q99735 147 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
BRF1-211ENST00000547530 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
BRF1-211ENST00000547530 SPSB4Q96A44 273 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 MIEN1Q9BRT3 115 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 CLEC5AQ9NY25 188 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 SH3BGRL2Q9UJC5 107 aa12.62□□□□□ -0.39
BRF1-211ENST00000547530 TOX3O15405 576 aaPredicted RBP12.61□□□□□ -0.39
BRF1-211ENST00000547530 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
BRF1-211ENST00000547530 GCHFRP30047 84 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 CCL11P51671 97 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
BRF1-211ENST00000547530 BRS3P32247 399 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 CLDN18P56856 261 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 BRWD1-AS2P59051 145 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
BRF1-211ENST00000547530 FAM173AQ9BQD7 235 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 WDR54Q9H977 334 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
BRF1-211ENST00000547530 RAB31Q13636 194 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 COQ2Q96H96 371 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 TMEM140Q9NV12 185 aa12.61□□□□□ -0.39
BRF1-211ENST00000547530 REG1AP05451 166 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 GFRA1P56159 465 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 RPL15P61313 204 aaKnown RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 NANOS1Q8WY41 292 aaKnown RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 CBY1Q9Y3M2 126 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 WNT2P09544 360 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 RPL8P62917 257 aaKnown RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 ACSF3Q4G176 576 aaPredicted RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 DHRS13Q6UX07 377 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 SNRNP40Q96DI7 357 aaKnown RBP12.6□□□□□ -0.39
BRF1-211ENST00000547530 NCKAP5O14513 1909 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 FAM90A10PA6NDY2 464 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 FAM90A18PA6NE21 464 aa12.6□□□□□ -0.39
BRF1-211ENST00000547530 FAM90A16PA6NEW6 464 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms