RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PEF1Q9UBV8 284 aaKnown RBP12.23□□□□□ -0.45
DDX54-204ENST00000546898 HMX3A6NHT5 357 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 H3BMQ9 156 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 M0QYG6 137 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 SAP30O75446 220 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 DHFRP00374 187 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 CRYGCP07315 174 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 TAS2R19P59542 299 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 RHOGP84095 191 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 DEFA5Q01523 94 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 THOC7Q6I9Y2 204 aaKnown RBP12.22□□□□□ -0.45
DDX54-204ENST00000546898 ACSM6Q6P461 480 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 NECAP1Q8NC96 275 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 ZNF486Q96H40 463 aaPredicted RBP12.22□□□□□ -0.45
DDX54-204ENST00000546898 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
DDX54-204ENST00000546898 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
DDX54-204ENST00000546898 A0A1B0GW64 132 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 ANKRD34BA5PLL1 514 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 E7EUB6 86 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 RBMXL2O75526 392 aaKnown RBP12.21□□□□□ -0.45
DDX54-204ENST00000546898 CD74P04233 296 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 CD3DP04234 171 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 PSMB6P28072 239 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 ECI1P42126 302 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 LPAR6P43657 344 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 ATP5G2Q06055 141 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.45
DDX54-204ENST00000546898 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 PHLDA2Q53GA4 152 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 LHFPL1Q86WI0 220 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 TMEM229BQ8NBD8 167 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 SMIM4Q8WVI0 70 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 DIRAS2Q96HU8 199 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 ELOVL1Q9BW60 279 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
DDX54-204ENST00000546898 ZNF256Q9Y2P7 627 aaPredicted RBP12.21□□□□□ -0.45
DDX54-204ENST00000546898 CGB1A6NKQ9 187 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 CTDSPLO15194 276 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 PRH1P02810 166 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 HIST1H1BP16401 226 aaKnown RBP12.2□□□□□ -0.46
DDX54-204ENST00000546898 CTRB1P17538 263 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 OR2B8PP59922 312 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 ZNF585BQ52M93 769 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 CTRB2Q6GPI1 263 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 OR4C12Q96R67 309 aa12.2□□□□□ -0.46
DDX54-204ENST00000546898 SLIRPQ9GZT3 109 aaKnown RBP12.2□□□□□ -0.46
DDX54-204ENST00000546898 C6orf62Q9GZU0 229 aaPredicted RBP12.2□□□□□ -0.46
DDX54-204ENST00000546898 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 OR2J3O76001 311 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 MYOD1P15172 320 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 AREGP15514 252 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX54-204ENST00000546898 RND3P61587 244 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 KLF5Q13887 457 aaPredicted RBP12.19□□□□□ -0.46
DDX54-204ENST00000546898 IL18Q14116 193 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 HSD17B13Q7Z5P4 300 aaPredicted RBP12.19□□□□□ -0.46
DDX54-204ENST00000546898 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
DDX54-204ENST00000546898 CEPT1Q9Y6K0 416 aa12.19□□□□□ -0.46
DDX54-204ENST00000546898 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.18□□□□□ -0.46
DDX54-204ENST00000546898 RAB3DO95716 219 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 KRASP01116 189 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 TRBV12-3P01733 135 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 PGAM2P15259 253 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 RPA2P15927 270 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 MEF2DQ14814 521 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 TATDN3Q17R31 274 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 RPEL1Q2QD12 228 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 FANCD2OSQ96PS1 177 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 PRR25Q96S07 402 aa12.18□□□□□ -0.46
DDX54-204ENST00000546898 NXF2Q9GZY0 626 aaKnown RBP12.18□□□□□ -0.46
DDX54-204ENST00000546898 IGLC7A0M8Q6 106 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 SNAPC5O75971 98 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 DEFA4P12838 97 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 G6PCP35575 357 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 C19orf35Q6ZS72 473 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 OR9G4Q8NGQ1 327 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 OR1L8Q8NGR8 309 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 TERB2Q8NHR7 220 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 MCFD2Q8NI22 146 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 RSL24D1Q9UHA3 163 aaKnown RBP12.17□□□□□ -0.46
DDX54-204ENST00000546898 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 PRNDQ9UKY0 176 aa12.17□□□□□ -0.46
DDX54-204ENST00000546898 IGLV11-55A0A075B6I3 123 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 TEX50A0A1B0GTY4 177 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 H0Y980 276 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 BMPR1BO00238 502 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 CYB5BO43169 146 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 REG1AP05451 166 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 TRAPPC2P0DI81 140 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 TRAPPC2BP0DI82 140 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 PPP5CP53041 499 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms