RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
DDX54-203ENST00000546869 TEX13DA0A0J9YY54 714 aaPredicted RBP11.28□□□□□ -0.6
DDX54-203ENST00000546869 CENPXA8MT69 81 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 TEX22C9J3V5 150 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 G6PCP35575 357 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
DDX54-203ENST00000546869 RUNX1Q01196 453 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 KLK9Q2XQG4 91 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 HIST2H2BDQ6DRA6 164 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 THOC7Q6I9Y2 204 aaKnown RBP11.28□□□□□ -0.6
DDX54-203ENST00000546869 SLC25A42Q86VD7 318 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 SGPP2Q8IWX5 399 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
DDX54-203ENST00000546869 GLYATL2Q8WU03 294 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 PHB2Q99623 299 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 KLK15Q9H2R5 256 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 KLK9Q9UKQ9 250 aa11.28□□□□□ -0.6
DDX54-203ENST00000546869 PLXNB1O43157 2135 aa11.27□□□□□ -0.6
DDX54-203ENST00000546869 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 TSPAN15O95858 294 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 CRYGCP07315 174 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 P0C879 139 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 PF4V1P10720 104 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 OR2B8PP59922 312 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 RBMS2Q15434 407 aaKnown RBP11.27□□□□□ -0.61
DDX54-203ENST00000546869 HSD17B13Q7Z5P4 300 aaPredicted RBP11.27□□□□□ -0.61
DDX54-203ENST00000546869 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
DDX54-203ENST00000546869 WFDC9Q8NEX5 89 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 OR5B3Q8NH48 314 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 TMEM230Q96A57 120 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 WDR12Q9GZL7 423 aaKnown RBP11.27□□□□□ -0.61
DDX54-203ENST00000546869 COMMD5Q9GZQ3 224 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 TMEM56-RWDD3S4R434 201 aa11.27□□□□□ -0.61
DDX54-203ENST00000546869 TNCP24821 2201 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 TEX50A0A1B0GTY4 177 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 A0A1B0GW64 132 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 E7EUB6 86 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 SNAPC5O75971 98 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 OR5AC1P0C628 307 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 SP6Q3SY56 376 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 TMEM128Q5BJH2 165 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 H2BFWTQ7Z2G1 175 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
DDX54-203ENST00000546869 TRBV9A0A0B4J1U6 114 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 A0A0G2JLM5 398 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 I3L521 148 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 PLA2G10O15496 165 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 NDUFB6O95139 128 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 MYCNOSP40205 109 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 UBE2MP61081 183 aaKnown RBP11.25□□□□□ -0.61
DDX54-203ENST00000546869 SUPT4H1P63272 117 aaKnown RBP11.25□□□□□ -0.61
DDX54-203ENST00000546869 TMEM187Q14656 261 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 ZNF846Q147U1 533 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 TRIM16LQ309B1 348 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 OR1L8Q8NGR8 309 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 RBPMSQ93062 196 aaKnown RBP11.25□□□□□ -0.61
DDX54-203ENST00000546869 USMG5Q96IX5 58 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
DDX54-203ENST00000546869 NDUFA4L2Q9NRX3 87 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
DDX54-203ENST00000546869 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 TRGV3P03979 118 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 TRAPPC2P0DI81 140 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 TRAPPC2BP0DI82 140 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 ANXA3P12429 323 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 AKR1C4P17516 323 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 CTRB1P17538 263 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 PSMB6P28072 239 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 BTCP35070 178 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 CTRB2Q6GPI1 263 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 C18orf65Q6ZTR6 163 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
DDX54-203ENST00000546869 OR4A16Q8NH70 328 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 FYTTD1Q96QD9 318 aaKnown RBP11.24□□□□□ -0.61
DDX54-203ENST00000546869 P2RX4Q99571 388 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
DDX54-203ENST00000546869 IGLC7A0M8Q6 106 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 HMX3A6NHT5 357 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 NUDT19A8MXV4 375 aa11.23□□□□□ -0.61
DDX54-203ENST00000546869 LYRM1O43325 122 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms