RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 LHBP01229 141 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 SELLP14151 372 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 MZT1Q08AG7 82 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 SGMS2Q8NHU3 365 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 TMEM18Q96B42 140 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 SARAFQ96BY9 339 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
CNN3-207ENST00000545882 CADP27708 2225 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 ZNF705GA8MUZ8 300 aaPredicted RBP12.56□□□□□ -0.4
CNN3-207ENST00000545882 GCHFRP30047 84 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 FAM201AQ5SY85 155 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 IGF2-ASQ6U949 168 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 TCF23Q7RTU1 214 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 MOGAT3Q86VF5 341 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 OR2V2Q96R30 315 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 PROCRQ9UNN8 238 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 OTOGLQ3ZCN5 2332 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 ZFHX4Q86UP3 3567 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 MDFIC2A0A1B0GVS7 189 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 FOXH1O75593 365 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 OR4A8P0C604 315 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 MYOD1P15172 320 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 HNF1AP20823 631 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 TIMP3P35625 211 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 EFNB3Q15768 340 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 OR4A47Q6IF82 309 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 C1orf174Q8IYL3 243 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 FAM169BQ8N8A8 192 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 PPP1R35Q8TAP8 253 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 NOL4LQ96MY1 436 aaPredicted RBP12.56□□□□□ -0.4
CNN3-207ENST00000545882 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
CNN3-207ENST00000545882 YLPM1P49750 1951 aaKnown RBP12.55□□□□□ -0.4
CNN3-207ENST00000545882 SAA2-SAA4A0A096LPE2 208 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 K7EN84 100 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 ITGB1BP1O14713 200 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 SAA2P0DJI9 122 aaPredicted RBP12.55□□□□□ -0.4
CNN3-207ENST00000545882 CCKARP32238 428 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 ZNF83P51522 516 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
CNN3-207ENST00000545882 STPG3Q8N7X2 389 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 OR4S2Q8NH73 311 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 TMEM14BQ9NUH8 114 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 NBEAQ8NFP9 2946 aa12.55□□□□□ -0.4
CNN3-207ENST00000545882 TRAV17A0A0B4J275 112 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 RNF224P0DH78 156 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 ADMP35318 185 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 YPEL3P61236 119 aaPredicted RBP12.54□□□□□ -0.4
CNN3-207ENST00000545882 HSPE1P61604 102 aaKnown RBP12.54□□□□□ -0.4
CNN3-207ENST00000545882 HLA-DRB5Q30154 266 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
CNN3-207ENST00000545882 SVILO95425 2214 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 AHRRA9YTQ3 701 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 CA2P00918 260 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 SNRPCP09234 159 aaKnown RBP12.54□□□□□ -0.4
CNN3-207ENST00000545882 NDUFB7P17568 137 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 NPY1RP25929 384 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 THBS3P49746 956 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 MRPL41Q8IXM3 137 aaKnown RBP12.54□□□□□ -0.4
CNN3-207ENST00000545882 ZNF439Q8NDP4 499 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 SLC24A4Q8NFF2 622 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 MISP3Q96FF7 219 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 BTF3L4Q96K17 158 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 NDUFAF3Q9BU61 184 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 CHODLQ9H9P2 273 aa12.54□□□□□ -0.4
CNN3-207ENST00000545882 TNCP24821 2201 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 LINC00869P0C866 280 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 IGFBP2P18065 325 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
CNN3-207ENST00000545882 RAB7AP51149 207 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 RPL31P62899 125 aaKnown RBP12.53□□□□□ -0.4
CNN3-207ENST00000545882 PRR20EP86478 221 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 PRR20CP86479 221 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 PRR20DP86480 221 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 PRR20BP86481 221 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 PRR20AP86496 221 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
CNN3-207ENST00000545882 NEUROG1Q92886 237 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 C11orf52Q96A22 123 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 C2orf88Q9BSF0 95 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
CNN3-207ENST00000545882 SPRY3O43610 288 aa12.52□□□□□ -0.4
CNN3-207ENST00000545882 RAB4BP61018 213 aa12.52□□□□□ -0.4
CNN3-207ENST00000545882 RHOBP62745 196 aa12.52□□□□□ -0.4
CNN3-207ENST00000545882 ALKBH2Q6NS38 261 aa12.52□□□□□ -0.4
CNN3-207ENST00000545882 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.4
CNN3-207ENST00000545882 FAM222BQ8WU58 562 aa12.52□□□□□ -0.4
CNN3-207ENST00000545882 ZNF318Q5VUA4 2279 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms