RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MYOD1P15172 320 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 CD24P25063 80 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 NHLH2Q02577 135 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 EBI3Q14213 229 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 CLEC9AQ6UXN8 241 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 BRD3OSQ6XYD6 125 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 SLC51BQ86UW2 128 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 TEX50A0A1B0GTY4 177 aa24.39■■□□□ 1.49
CCM2-219ENST00000544363 SPDEFO95238 335 aa24.39■■□□□ 1.49
CCM2-219ENST00000544363 HES1Q14469 280 aa24.39■■□□□ 1.49
CCM2-219ENST00000544363 OR5B3Q8NH48 314 aa24.39■■□□□ 1.49
CCM2-219ENST00000544363 BSCL2Q96G97 398 aaPredicted RBP24.39■■□□□ 1.49
CCM2-219ENST00000544363 ZNF430Q9H8G1 570 aaPredicted RBP24.39■■□□□ 1.49
CCM2-219ENST00000544363 TPSG1Q9NRR2 321 aa24.39■■□□□ 1.49
CCM2-219ENST00000544363 TAAR5O14804 337 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 BRS3P32247 399 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 HNF4GQ14541 408 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 KLF17Q5JT82 389 aaPredicted RBP24.38■■□□□ 1.49
CCM2-219ENST00000544363 SPANXN5Q5MJ07 72 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 CYB5R2Q6BCY4 276 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 CLCC1Q96S66 551 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 METTL1Q9UBP6 276 aaKnown RBP24.38■■□□□ 1.49
CCM2-219ENST00000544363 FBXL17Q9UF56 701 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 SIGLEC9Q9Y336 463 aa24.38■■□□□ 1.49
CCM2-219ENST00000544363 VDAC2P45880 294 aaPredicted RBP24.37■■□□□ 1.49
CCM2-219ENST00000544363 BAXQ07812 192 aa24.37■■□□□ 1.49
CCM2-219ENST00000544363 MRGPRG-AS1Q2M3A8 158 aa24.37■■□□□ 1.49
CCM2-219ENST00000544363 ZNF471Q9BX82 626 aaPredicted RBP24.37■■□□□ 1.49
CCM2-219ENST00000544363 COMMD5Q9GZQ3 224 aa24.37■■□□□ 1.49
CCM2-219ENST00000544363 CYTL1Q9NRR1 136 aa24.37■■□□□ 1.49
CCM2-219ENST00000544363 HOXA1P49639 335 aaPredicted RBP24.36■■□□□ 1.49
CCM2-219ENST00000544363 F2RL1P55085 397 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 PRCDQ00LT1 54 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 MMDQ15546 238 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 THNSL2Q86YJ6 484 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 NPBQ8NG41 125 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 OR8H1Q8NGG4 311 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 HIPK2Q9H2X6 1198 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 TNCP24821 2201 aa24.36■■□□□ 1.49
CCM2-219ENST00000544363 RRHO14718 337 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 PRSS8Q16651 343 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 FBLN7Q53RD9 439 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 STX12Q86Y82 276 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 MMD2Q8IY49 270 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 Q8N6K4 173 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 OR1L8Q8NGR8 309 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 SMIM3Q9BZL3 60 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 FBXL15Q9H469 300 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 HEYLQ9NQ87 328 aaPredicted RBP24.35■■□□□ 1.49
CCM2-219ENST00000544363 RGS13O14921 159 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 NBR2O15453 112 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 CST7O76096 145 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 OPN1MWP04001 364 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 FAM106CPP0CH98 169 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 OPN1MW2P0DN77 364 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 OPN1MW3P0DN78 364 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 SULT1A1P50225 295 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 TMEM267Q0VDI3 215 aaPredicted RBP24.35■■□□□ 1.49
CCM2-219ENST00000544363 PJVKQ0ZLH3 352 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 TEX261Q6UWH6 196 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 TMEM14EPQ6UXP3 125 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 PPP1R27Q86WC6 154 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 HINT2Q9BX68 163 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 STRAPQ9Y3F4 350 aaKnown RBP24.35■■□□□ 1.49
CCM2-219ENST00000544363 U3KQ87 197 aa24.35■■□□□ 1.49
CCM2-219ENST00000544363 CSMD1Q96PZ7 3565 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 A0A0U1RQK1 487 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 NDUFA3O95167 84 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 FAM120AOSQ5T036 256 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 CIARTQ8N365 385 aaPredicted RBP24.34■■□□□ 1.49
CCM2-219ENST00000544363 OR4C12Q96R67 309 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 MEGF9Q9H1U4 602 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 ENY2Q9NPA8 101 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 KIAA1456Q9P272 454 aa24.34■■□□□ 1.49
CCM2-219ENST00000544363 HECTD1Q9ULT8 2610 aa24.33■■□□□ 1.49
CCM2-219ENST00000544363 UBA52P62987 128 aaKnown RBP24.33■■□□□ 1.49
CCM2-219ENST00000544363 PLEKHA3Q9HB20 300 aa24.33■■□□□ 1.49
CCM2-219ENST00000544363 NDUFA4L2Q9NRX3 87 aa24.33■■□□□ 1.49
CCM2-219ENST00000544363 ITPR2Q14571 2701 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 CFDP00746 253 aaPredicted RBP24.32■■□□□ 1.48
CCM2-219ENST00000544363 METTL15P1P0C7V9 234 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 TMEM11P17152 192 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 MAS1LP35410 378 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 DYNLT3P51808 116 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 PLGLAQ15195 96 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 TMEM217Q8N7C4 229 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 ST8SIA2Q92186 375 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 FAM96BQ9Y3D0 163 aa24.32■■□□□ 1.48
CCM2-219ENST00000544363 BPIFB3P59826 476 aa24.31■■□□□ 1.48
CCM2-219ENST00000544363 RPP30P78346 268 aaKnown RBP24.31■■□□□ 1.48
CCM2-219ENST00000544363 ZNF680Q8NEM1 530 aa24.31■■□□□ 1.48
CCM2-219ENST00000544363 OR5C1Q8NGR4 320 aa24.31■■□□□ 1.48
CCM2-219ENST00000544363 STOML3Q8TAV4 291 aa24.31■■□□□ 1.48
CCM2-219ENST00000544363 WFDC1Q9HC57 220 aa24.31■■□□□ 1.48
CCM2-219ENST00000544363 RPL7L1Q6DKI1 246 aaKnown RBP24.3■■□□□ 1.48
CCM2-219ENST00000544363 ITGB1BP2Q9UKP3 347 aa24.3■■□□□ 1.48
CCM2-219ENST00000544363 PAIP2BQ9ULR5 123 aaKnown RBP24.3■■□□□ 1.48
CCM2-219ENST00000544363 SVEP1Q4LDE5 3571 aa24.3■■□□□ 1.48
CCM2-219ENST00000544363 E7EUB6 86 aa24.29■■□□□ 1.48
CCM2-219ENST00000544363 ACTL6BO94805 426 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms