RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 BLNKQ8WV28 456 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 PP6455Q8WZ26 134 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 C1QTNF5Q9BXJ0 243 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 MAP1LC3BQ9GZQ8 125 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 OR51I2Q9H344 312 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 MRPL16Q9NX20 251 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 ERG28Q9UKR5 140 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 TRAPPC1Q9Y5R8 145 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 FRYQ5TBA9 3013 aa6.7□□□□□ -1.34
PDLIM5-221ENST00000542407 A0A1W2PR80 420 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 FOXI3A8MTJ6 420 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 HAX1O00165 279 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 SMIM17P0DL12 118 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 HSD52Q0P140 79 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 GUSBP1Q15486 140 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 DEFB109BQ30KR1 87 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 ACTL10Q5JWF8 245 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 TCTEX1D1Q8N7M0 179 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 CMTM2Q8TAZ6 248 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 GPHA2Q96T91 129 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 VSIRQ9H7M9 311 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 RPRMQ9NS64 109 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 CISD1Q9NZ45 108 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 CLCF1Q9UBD9 225 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 UQCR10Q9UDW1 63 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 SS18L1O75177 396 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 HRASP01112 189 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 OR8B8Q15620 311 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 KISS1Q15726 138 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 FAM78BQ5VT40 261 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 TGIF2LYQ8IUE0 185 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 HSPB9Q9BQS6 159 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 GP6Q9HCN6 339 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNF581Q9P0T4 197 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 ANXA10Q9UJ72 324 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 ARHGAP21Q5T5U3 1957 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 IGKV1-27A0A075B6S5 117 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 IGHV1-69-2A0A0G2JMI3 117 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 TMEM213A2RRL7 107 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 SLC22A20A6NK97 555 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNF732B4DXR9 585 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 TMEM267Q0VDI3 215 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 CD300EQ496F6 205 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 Q6ZN92 141 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 OR5D13Q8NGL4 314 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 C18orf12Q96KH6 178 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 GPR82Q96P67 336 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 FAM103A1Q9BTL3 118 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 MCRIP2Q9BUT9 160 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 PRRG4Q9BZD6 226 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 TMEM106BQ9NUM4 274 aa6.69□□□□□ -1.34
PDLIM5-221ENST00000542407 TNRC6AQ8NDV7 1962 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 BSNQ9UPA5 3926 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 TRAV17A0A0B4J275 112 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 CLDN1O95832 211 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 ERVK11-1P61568 191 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 RPL23P62829 140 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 KIAA1644Q3SXP7 199 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 Q6ZWC4 215 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 NEGR1Q7Z3B1 354 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNF695Q8IW36 515 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 OR10G4Q8NGN3 311 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 MSI2Q96DH6 328 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 CDC42EP3Q9UKI2 254 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 LAMA5O15230 3695 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNF407Q9C0G0 2248 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNHIT1O43257 154 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNF737O75373 536 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 LRRC10Q5BKY1 277 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 ACSM6Q6P461 480 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 IGFL3Q6UXB1 125 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 TMEM116Q8NCL8 245 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 SCGB1C1Q8TD33 95 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 RCHY1Q96PM5 261 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 PYGO2Q9BRQ0 406 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 NDFIP1Q9BT67 221 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 SAMD10Q9BYL1 202 aa6.68□□□□□ -1.34
PDLIM5-221ENST00000542407 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 CHST1O43916 411 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 FCGR2AP12318 317 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 KRTDAPP60985 99 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 C3orf36Q3SXR2 165 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 RNASEKQ6P5S7 137 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 TCF23Q7RTU1 214 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 OR5A2Q8NGI9 324 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 GMPPAQ96IJ6 420 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 BTF3L4Q96K17 158 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 ATP5SQ99766 215 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 PLK3Q9H4B4 646 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 ZNF286AQ9HBT8 521 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 TMEM50AO95807 157 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 IGLC1P0CG04 106 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 TPPP2P59282 170 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
PDLIM5-221ENST00000542407 TM2D1Q9BX74 207 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms