RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TMEM140Q9NV12 185 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 COA4Q9NYJ1 87 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 NSG2Q9Y328 171 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 V9GYH0 126 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 TEX50A0A1B0GTY4 177 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 ANKRD20A5PA0PJZ0 165 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 ANKRD34BA5PLL1 514 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 DPPA5A6NC42 116 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 MARCH11A6NNE9 402 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 H3BUA1 57 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 TRBV12-3P01733 135 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 REG1AP05451 166 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 OR9G9P0C7N8 305 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 TBPP20226 339 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 MAS1LP35410 378 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 RPL27AP46776 148 aaKnown RBP7.49□□□□□ -1.21
YBX3-212ENST00000542002 MRPS10P82664 201 aaKnown RBP7.49□□□□□ -1.21
YBX3-212ENST00000542002 SSBP1Q04837 148 aaKnown RBP7.49□□□□□ -1.21
YBX3-212ENST00000542002 ZNF616Q08AN1 781 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 EGFEM1PQ0D2K5 195 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 ZNF79Q15937 498 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 CCDC190Q86UF4 302 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 ARRDC1Q8N5I2 433 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 OR10W1Q8NGF6 305 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 OR4C16Q8NGL9 310 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 OR13C8Q8NGS7 320 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 OR4A5Q8NH83 315 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 VSTM2AQ8TAG5 236 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 MARCH1Q8TCQ1 289 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 BORCS5Q969J3 196 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 FANCD2OSQ96PS1 177 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 SPIN2AQ99865 258 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 SPIN2BQ9BPZ2 258 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 RTBDNQ9BSG5 229 aaPredicted RBP7.49□□□□□ -1.21
YBX3-212ENST00000542002 THAP7Q9BT49 309 aaPredicted RBP7.49□□□□□ -1.21
YBX3-212ENST00000542002 AKIP1Q9NQ31 210 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 AURKAIP1Q9NWT8 199 aaPredicted RBP7.49□□□□□ -1.21
YBX3-212ENST00000542002 DMRT1Q9Y5R6 373 aa7.49□□□□□ -1.21
YBX3-212ENST00000542002 WI2-2373I1.2A0A1W2PRP0 233 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 LINC01619G3V211 115 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 ACTL6BO94805 426 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 HSPB1P04792 205 aaKnown RBP7.48□□□□□ -1.21
YBX3-212ENST00000542002 CRYGCP07315 174 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 PGAM2P15259 253 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 PSMB6P28072 239 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 CD40LGP29965 261 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 PPP5CP53041 499 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 PIGPP57054 158 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 RND3P61587 244 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 RHOGP84095 191 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 IZUMO4Q1ZYL8 232 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 SP6Q3SY56 376 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 SCGB2B2Q4G0G5 96 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 ZNF343Q6P1L6 599 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 DMBX1Q8NFW5 382 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 SEC22AQ96IW7 307 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 TP53RKQ96S44 253 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 AIFM2Q9BRQ8 373 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 COMMD9Q9P000 198 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 TNCP24821 2201 aa7.48□□□□□ -1.21
YBX3-212ENST00000542002 C13orf42A0A1B0GVH6 325 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 IGLC7A0M8Q6 106 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 NPIPB5A8MRT5 1133 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 CREBL2O60519 120 aaPredicted RBP7.47□□□□□ -1.21
YBX3-212ENST00000542002 OR2J3O76001 311 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 NDUFB8O95169 186 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 DUS4LO95620 317 aaKnown RBP7.47□□□□□ -1.21
YBX3-212ENST00000542002 IGKV1-5P01602 117 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 OR8U8P0C7N1 319 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 AKAIN1P0CW23 69 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 CTRB1P17538 263 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 PTBP1P26599 531 aaKnown RBP eCLIP7.47□□□□□ -1.21
YBX3-212ENST00000542002 WT1-ASQ06250 92 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 KLF9Q13886 244 aaPredicted RBP7.47□□□□□ -1.21
YBX3-212ENST00000542002 MEF2DQ14814 521 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 KLK9Q2XQG4 91 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 CTRB2Q6GPI1 263 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 IL34Q6ZMJ4 242 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 CADM3Q8N126 398 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 OR51S1Q8NGJ8 323 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 OR6Q1Q8NGQ2 317 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 DPF1Q92782 380 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 TRIM63Q969Q1 353 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 ZNF486Q96H40 463 aaPredicted RBP7.47□□□□□ -1.21
YBX3-212ENST00000542002 USMG5Q96IX5 58 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 C5orf66Q9H5L9 145 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 NDUFA4L2Q9NRX3 87 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 FAM212BQ9NTI7 297 aaPredicted RBP7.47□□□□□ -1.21
YBX3-212ENST00000542002 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
YBX3-212ENST00000542002 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 RABL2BQ9UNT1 228 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 GPR132Q9UNW8 380 aa7.47□□□□□ -1.21
YBX3-212ENST00000542002 A0A0B4J293 547 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 A0A0G2JLM5 398 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 C3orf85A0A1B0GTC6 90 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 SEC14L6B5MCN3 397 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 K7EIL1 84 aa7.46□□□□□ -1.22
YBX3-212ENST00000542002 CTSDP07339 412 aaPredicted RBP7.46□□□□□ -1.22
YBX3-212ENST00000542002 P0C879 139 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms