RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PPP1R35Q8TAP8 253 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 NEU1Q99519 415 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 SEPSECSQ9HD40 501 aaKnown RBP10.14□□□□□ -0.79
NPC1-202ENST00000540608 LY96Q9Y6Y9 160 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 PCNX2A6NKB5 2137 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 KIR2DL5BA0A0G2JN68 375 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 KIR2DL5BA0A0G2JPC4 375 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 TCAPO15273 167 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 MT-CO2P00403 227 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 IGLV1-44P01699 117 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 THBS3P49746 956 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 RPL31P62899 125 aaKnown RBP10.14□□□□□ -0.79
NPC1-202ENST00000540608 ARSJQ5FYB0 599 aaPredicted RBP10.14□□□□□ -0.79
NPC1-202ENST00000540608 TEPPQ6URK8 271 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 KIR2DL5AQ8N109 375 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 DDB2Q92466 427 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 C11orf52Q96A22 123 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 OPN3Q9H1Y3 402 aaPredicted RBP10.14□□□□□ -0.79
NPC1-202ENST00000540608 DUSP13Q9UII6 198 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 TRGV10A0A0A0MS01 117 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 SRRM5B3KS81 715 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 C9JCJ5 164 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 K7EN84 100 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 NKX2-8O15522 239 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 FOSL1P15407 271 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 PAFAH1B2P68402 229 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 VWA1Q6PCB0 445 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 C1orf174Q8IYL3 243 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 ZCCHC14Q8WYQ9 949 aaKnown RBP10.14□□□□□ -0.79
NPC1-202ENST00000540608 SNHG12Q9BXW3 62 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 PRR14LQ5THK1 2151 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 C15orf61A6NNL5 157 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 ESDP10768 282 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 RPL29P47914 159 aaKnown RBP10.13□□□□□ -0.79
NPC1-202ENST00000540608 RAB31Q13636 194 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 SPATA31B1PQ5VZV4 182 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 STPG3Q8N7X2 389 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 OR2Z1Q8NG97 314 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 OR4S2Q8NH73 311 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 TP53TG3Q9ULZ0 132 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 IGHV2OR16-5A0A0B4J2B6 119 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 GRIFINA4D1Z8 144 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 A8MXE2 369 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 M0R143 59 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 FOXH1O75593 365 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 IGHV3-13P01766 116 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 IGHV3-7P01780 117 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 AREGP15514 252 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 CCL11P51671 97 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
NPC1-202ENST00000540608 UHRF2Q96PU4 802 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 TMEM106BQ9NUM4 274 aa10.13□□□□□ -0.79
NPC1-202ENST00000540608 TET2Q6N021 2002 aaPredicted RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 IGHV1-18A0A0C4DH31 117 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 ITGB1BP1O14713 200 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 CBLN1P23435 193 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 NPY1RP25929 384 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 CFHR2P36980 270 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 TPPP2P59282 170 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 HSPE1P61604 102 aaKnown RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 C9orf106Q8NAJ2 232 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 SLC24A4Q8NFF2 622 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 FDCSPQ8NFU4 85 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 TBX15Q96SF7 602 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 MRPL18Q9H0U6 180 aaKnown RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 FOXA2Q9Y261 457 aaPredicted RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 SLC17A3O00476 420 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 RAB7AP51149 207 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 LGALS4P56470 323 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 ZNF124Q15973 351 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 EAF1Q96JC9 268 aaPredicted RBP10.12□□□□□ -0.79
NPC1-202ENST00000540608 CBLN4Q9NTU7 201 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 TMEM14BQ9NUH8 114 aa10.12□□□□□ -0.79
NPC1-202ENST00000540608 CGB3P0DN86 165 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 CGB7P0DN87 165 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 CRISP2P16562 243 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 PRR20EP86478 221 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 PRR20CP86479 221 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 PRR20DP86480 221 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 PRR20BP86481 221 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 PRR20AP86496 221 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 PLSCR4Q9NRQ2 329 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 CALYQ9NYX4 217 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 BOD1L1Q8NFC6 3051 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 IGHV3OR15-7A0A075B7D8 119 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 FNDC10F2Z333 226 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 CA2P00918 260 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 RAB4AP20338 218 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 LINC00310P59036 64 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
NPC1-202ENST00000540608 OR4A47Q6IF82 309 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 Q6ZWC4 215 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 GCSAMQ8N6F7 178 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 ZNRF1Q8ND25 227 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms