RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TRAT1Q6PIZ9 186 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 FAM169BQ8N8A8 192 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 CDRT4Q8N9R6 151 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 OR10G9Q8NGN4 311 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 OR10G7Q8NGN6 311 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 OSR1Q8TAX0 266 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-214ENST00000540539 C10orf35Q96D05 121 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 TMEM191AQ9H0A3 160 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 TNFRSF19Q9NS68 423 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-214ENST00000540539 TRAV25A0A0B4J276 109 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 XGP55808 180 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 GRB2P62993 217 aaKnown RBP7.91□□□□□ -1.14
CLIP1-214ENST00000540539 CATR1Q13166 79 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 CEACAM16Q2WEN9 425 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 TIGITQ495A1 244 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 OR51E1Q8TCB6 317 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 GPHA2Q96T91 129 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 KCNIP2Q9NS61 270 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 V9GYV3 84 aa7.91□□□□□ -1.14
CLIP1-214ENST00000540539 SDK1Q7Z5N4 2213 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 PRSS37A4D1T9 235 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 SH2D7A6NKC9 451 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-214ENST00000540539 KLF7O75840 302 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-214ENST00000540539 APCSP02743 223 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 PRTN3P24158 256 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 CR1LQ2VPA4 569 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 Q6ZUT4 128 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 GCSAMQ8N6F7 178 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 C18orf15Q96N68 181 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 OR2W1Q9Y3N9 320 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 R4GN57 208 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 SNRNP200O75643 2136 aaKnown RBP7.9□□□□□ -1.14
CLIP1-214ENST00000540539 ABCA7Q8IZY2 2146 aa7.9□□□□□ -1.14
CLIP1-214ENST00000540539 PCDH15Q96QU1 1955 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 FAM90A27PA6NNH2 459 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 F8W1H4 67 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 SYNGR1O43759 233 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 ANGPTL7O43827 346 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 IGLV3-19P01714 112 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 AMY1AP04745 511 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 HERV-K104P61576 105 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 LINC00696Q6ZRV3 163 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 PRSS41Q7RTY9 318 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 TBC1D26Q86UD7 250 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 TMEM54Q969K7 222 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 RAB40CQ96S21 281 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 PMCHL2Q9BQD1 86 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 MCRIP2Q9BUT9 160 aaKnown RBP7.9□□□□□ -1.15
CLIP1-214ENST00000540539 RABAC1Q9UI14 185 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 RALGAPA1Q6GYQ0 2036 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 MYO7BQ6PIF6 2116 aa7.9□□□□□ -1.15
CLIP1-214ENST00000540539 KNL1Q8NG31 2342 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 SCO2A0A1W2PP80 73 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 A0A1W2PQU0 124 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 C11orf98E9PRG8 122 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 K7ESF4 209 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 RPS21P63220 83 aaKnown RBP7.89□□□□□ -1.15
CLIP1-214ENST00000540539 HBG1P69891 147 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 HBG2P69892 147 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 GCSAMLQ5JQS6 135 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 SPACA3Q8IXA5 215 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 MED29Q9NX70 200 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 TIMM9Q9Y5J7 89 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 A0A0G2JRQ6 117 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 SCGB2A1O75556 95 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 IGKV1D-16P01601 117 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 FGF6P10767 208 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 IAPPP10997 89 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 TCL1AP56279 114 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 KLRD1Q13241 179 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 PDLIM3Q53GG5 364 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-214ENST00000540539 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 TIMM23BQ5SRD1 257 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 TMEM42Q69YG0 159 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 PBOV1Q9GZY1 135 aa7.89□□□□□ -1.15
CLIP1-214ENST00000540539 CSDC2Q9Y534 153 aaKnown RBP7.89□□□□□ -1.15
CLIP1-214ENST00000540539 CD300LBA8K4G0 201 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 FABP5P3A8MUU1 101 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 DHHO43323 396 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 IGHV3-7P01780 117 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 SP9P0CG40 484 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 MGST1P10620 155 aaKnown RBP7.88□□□□□ -1.15
CLIP1-214ENST00000540539 CPMP14384 443 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 PLP2Q04941 152 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 FHL3Q13643 280 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 ZNF547Q8IVP9 402 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 TIMM29Q9BSF4 260 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 TRGV10A0A0A0MS01 117 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 IGHV1OR15-9A0A0B4J2B8 117 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 IGKV1-9A0A0C4DH69 117 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 hADV38S2A0JD32 116 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 K7ESM1 405 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 OR9G9P0C7N8 305 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 CRIP3Q6Q6R5 217 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 TMEM105Q8N8V8 129 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms