RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 RHOGP84095 191 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 IL18Q14116 193 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 ZNF343Q6P1L6 599 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 OR4A5Q8NH83 315 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 SMIM4Q8WVI0 70 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 SLC2A9Q9NRM0 540 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 OR2J3O76001 311 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 G6PCP35575 357 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 PPP5CP53041 499 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 OR2B8PP59922 312 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 SLC38A6Q8IZM9 456 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 TMEM229BQ8NBD8 167 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 C15orf40Q8WUR7 153 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 MRGPRFQ96AM1 343 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 NXF2Q9GZY0 626 aaKnown RBP11.56□□□□□ -0.56
UBE3B-212ENST00000540230 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
UBE3B-212ENST00000540230 NPIPB5A8MRT5 1133 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 KRASP01116 189 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 IGKV1-39P01597 117 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 IGKV1D-39P04432 117 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 IFNA6P05013 189 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 CTRB1P17538 263 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 TAS2R19P59542 299 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 CTRB2Q6GPI1 263 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 STEAP1BQ6NZ63 245 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 LPCAT3Q6P1A2 487 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 ARRDC1Q8N5I2 433 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 MCFD2Q8NI22 146 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 USMG5Q96IX5 58 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 PRR25Q96S07 402 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 AIFM2Q9BRQ8 373 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 RANGRFQ9HD47 186 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-212ENST00000540230 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 IGLC7A0M8Q6 106 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 CCDC160A6NGH7 325 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 FAM223BA6NKX1 122 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 CTDSPLO15194 276 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 SAP30O75446 220 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 RAB3DO95716 219 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 CRYGCP07315 174 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 PGAM2P15259 253 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 TBPP20226 339 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 PSMB6P28072 239 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 TNFSF8P32971 234 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 ECI1P42126 302 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 MRPS10P82664 201 aaKnown RBP11.55□□□□□ -0.56
UBE3B-212ENST00000540230 EXOSC2Q13868 293 aaKnown RBP11.55□□□□□ -0.56
UBE3B-212ENST00000540230 ACSM6Q6P461 480 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 HAPLN4Q86UW8 402 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 OR10W1Q8NGF6 305 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 SOSTQ9BQB4 213 aa11.55□□□□□ -0.56
UBE3B-212ENST00000540230 PEF1Q9UBV8 284 aaKnown RBP11.55□□□□□ -0.56
UBE3B-212ENST00000540230 DPPA5A6NC42 116 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 DBX1A6NMT0 343 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 ERVK-16P61578 105 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 C15orf32Q32M92 178 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 SCGB2B2Q4G0G5 96 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 SLC25A42Q86VD7 318 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 DMRT1Q9Y5R6 373 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 S4R3C0 116 aa11.54□□□□□ -0.56
UBE3B-212ENST00000540230 TEX50A0A1B0GTY4 177 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 BMPR1BO00238 502 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 NDUFB8O95169 186 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 IGHV3-23P01764 117 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 PIGPP57054 158 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 RND3P61587 244 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 SSBP1Q04837 148 aaKnown RBP11.53□□□□□ -0.56
UBE3B-212ENST00000540230 ATP5G2Q06055 141 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-212ENST00000540230 NECAP1Q8NC96 275 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 OR4C16Q8NGL9 310 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 MARCH1Q8TCQ1 289 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 SEC22AQ96IW7 307 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 TP53RKQ96S44 253 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 COMMD5Q9GZQ3 224 aa11.53□□□□□ -0.56
UBE3B-212ENST00000540230 ZP3P21754 424 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 PTBP1P26599 531 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBE3B-212ENST00000540230 S100GP29377 79 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 INSL3P51460 131 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 SYNJ2BPP57105 145 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 DEFB121Q5J5C9 76 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 ZNF429Q86V71 674 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 OR13C8Q8NGS7 320 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 TERB2Q8NHR7 220 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
UBE3B-212ENST00000540230 FAM212BQ9NTI7 297 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-212ENST00000540230 RSL24D1Q9UHA3 163 aaKnown RBP11.52□□□□□ -0.57
UBE3B-212ENST00000540230 FBXL7Q9UJT9 491 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 SORL1Q92673 2214 aa11.52□□□□□ -0.57
UBE3B-212ENST00000540230 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 PPP5D1E7EU14 171 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 GSTZ1O43708 216 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-212ENST00000540230 FGF2P09038 288 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 WT1-ASQ06250 92 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 KLK9Q2XQG4 91 aa11.51□□□□□ -0.57
UBE3B-212ENST00000540230 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-212ENST00000540230 CCDC140Q96MF4 163 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms