RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 COX7A2P2O60397 106 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 P01737 135 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 P04436 131 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 CTLA4P16410 223 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 LHX2P50458 406 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 MS4A18Q3C1V0 323 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 MYOZ3Q8TDC0 251 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 HDHD3Q9BSH5 251 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-214ENST00000540109 MUC21A0A0G2JKD1 596 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 MUC21A0A140T8X8 626 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 C21orf140B9A014 251 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 RAMP3O60896 148 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 IGFBP3P17936 291 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-214ENST00000540109 SRD5A2P31213 254 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 Q0VG73 95 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 GAGE2BQ13066 116 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 CEACAM16Q2WEN9 425 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 GAGE2EQ4V326 116 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 MUC21Q5SSG8 566 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 FOXL2NBQ6ZUU3 175 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 TCF24Q7RTU0 167 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 OR2Z1Q8NG97 314 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 GAGE2DQ9UEU5 116 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 KLHDC2Q9Y2U9 406 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 SSPNQ14714 243 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 SRSF7Q16629 238 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTPRD-214ENST00000540109 ZNF324BQ6AW86 544 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-214ENST00000540109 SLC25A47Q6Q0C1 308 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 BHLHA15Q7RTS1 189 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM116Q8NCL8 245 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 MRAPQ8TCY5 172 aa5.17□□□□□ -1.58
PTPRD-214ENST00000540109 C5orf49A4QMS7 147 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 COX6A1P12074 109 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 GFRA1P56159 465 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 UBE2L3P68036 154 aaKnown RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 NRN1LQ496H8 165 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 C6orf15Q6UXA7 325 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 ALKBH3Q96Q83 286 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 SPAG17Q6Q759 2223 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 A0A0U1RQV5 110 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 H3BTX0 84 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 K7EP13 123 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 TSPOP30536 169 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 ID1P41134 155 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 RPS15P62841 145 aaKnown RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 FAM166AQ6J272 317 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 TBC1D26Q86UD7 250 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 ABCA7Q8IZY2 2146 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 FBXL14Q8N1E6 418 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 OR4F17Q8NGA8 305 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 APOBEC3DQ96AK3 386 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 ABHD14AQ9BUJ0 271 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 LIFP15018 202 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 PTGDSP41222 190 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 LY6G6FQ5SQ64 297 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 C3orf56Q8N813 242 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 RDH5Q92781 318 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 COLQQ9Y215 455 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 CHCHD2Q9Y6H1 151 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 A0A0G2JLM5 398 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 PPYP01298 95 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 ZNF708P17019 499 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 CCL1P22362 96 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 CA6P23280 308 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 SOX8P57073 446 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 CCL20P78556 96 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 KISS1Q15726 138 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 SAMD5Q5TGI4 173 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 STPG4Q8N801 248 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 BOKQ9UMX3 212 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 A0A1W2PP11 408 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM189A5PLL7 270 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 SP1P08047 785 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 CLDN18P56856 261 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 SRSF6Q13247 344 aaKnown RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 TAF15Q92804 592 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 RNF166Q96A37 237 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 NPVFQ9HCQ7 196 aa5.16□□□□□ -1.58
PTPRD-214ENST00000540109 MRPL16Q9NX20 251 aaKnown RBP5.16□□□□□ -1.58
PTPRD-214ENST00000540109 A0A087X0K7 114 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 hADV38S2A0JD32 116 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 TNFRSF6BO95407 300 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 SLC25A5P05141 298 aaKnown RBP5.15□□□□□ -1.58
PTPRD-214ENST00000540109 MMD2Q8IY49 270 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM54Q969K7 222 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 EXPH5Q8NEV8 1989 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 C9JCJ5 164 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 SIVA1O15304 175 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 PRKNO60260 465 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-214ENST00000540109 ICAM4Q14773 271 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 PSG5Q15238 335 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM95Q3KNT9 176 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 AAED1Q7RTV5 226 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 C11orf40Q8WZ69 217 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 SLC25A10Q9UBX3 287 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-214ENST00000540109 MRPS18BQ9Y676 258 aaKnown RBP5.15□□□□□ -1.58
PTPRD-214ENST00000540109 EML5Q05BV3 1969 aa5.15□□□□□ -1.58
PTPRD-214ENST00000540109 TDRD6O60522 2096 aaKnown RBP5.15□□□□□ -1.59
PTPRD-214ENST00000540109 TRAV38-1A0A0B4J264 116 aa5.15□□□□□ -1.59
PTPRD-214ENST00000540109 IGHV3-20A0A0C4DH32 117 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms