RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 NPIPA3F8WFD2 350 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 H3BMH7 237 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 H3BML4 177 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 H3BRM9 83 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 IFNL4K9M1U5 179 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 M0QZ24 198 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 BMPR1BO00238 502 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 SIVA1O15304 175 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 HAND1O96004 215 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 PSG1P11464 419 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 ANOS1P23352 680 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 GCHFRP30047 84 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 ATP5G3P48201 142 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 GNG4P50150 75 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 RPL31P62899 125 aaKnown RBP5.57□□□□□ -1.52
USP28-207ENST00000538475 DEFB103AP81534 67 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 NHLH1Q02575 133 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 DAZAP2Q15038 168 aaPredicted RBP5.57□□□□□ -1.52
USP28-207ENST00000538475 CEACAM21Q3KPI0 293 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 UFSP1Q6NVU6 142 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 Q6ZSR6 202 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 NEGR1Q7Z3B1 354 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 Q8IYB0 196 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 ST6GALNAC3Q8NDV1 305 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 C18orf32Q8TCD1 76 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 ABHD3Q8WU67 409 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 GATAD1Q8WUU5 269 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 CYYR1Q96J86 154 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 AP1S3Q96PC3 154 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 TAAR6Q96RI8 345 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 FAM103A1Q9BTL3 118 aaKnown RBP5.57□□□□□ -1.52
USP28-207ENST00000538475 MYO7AQ13402 2215 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 UNC13CQ8NB66 2214 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 A0A1B0GX78 115 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 C5orf63A6NC05 138 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 HELTA6NFD8 242 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 GAGE10A6NGK3 116 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 AHRRA9YTQ3 701 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 J3QR89 54 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 M0R2Z0 102 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 ZIC3O60481 467 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 NUDT3O95989 172 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 GDF1P27539 372 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 SRIP30626 198 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 PTGDSP41222 190 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 GPM6AP51674 278 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 PPP1CAP62136 330 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 PSG9Q00887 426 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 PMP22Q01453 160 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 CARD17Q5XLA6 110 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 FAM180AQ6UWF9 173 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 PQLC2Q6ZP29 291 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 SPATA12Q7Z6I5 190 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 RPS19BP1Q86WX3 136 aaKnown RBP5.56□□□□□ -1.52
USP28-207ENST00000538475 C17orf82Q86X59 251 aaPredicted RBP5.56□□□□□ -1.52
USP28-207ENST00000538475 OR8I2Q8N0Y5 310 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 METTL27Q8N6F8 245 aaPredicted RBP5.56□□□□□ -1.52
USP28-207ENST00000538475 ZNF645Q8N7E2 425 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 Q8N7P7 452 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 NHLRC2Q8NBF2 726 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 ZNF114Q8NC26 417 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 NFAM1Q8NET5 270 aaPredicted RBP5.56□□□□□ -1.52
USP28-207ENST00000538475 OR1N2Q8NGR9 330 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 OR2Y1Q8NGV0 311 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 PIGCQ92535 297 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 TMEM186Q96B77 213 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 ZNF501Q96CX3 271 aaPredicted RBP5.56□□□□□ -1.52
USP28-207ENST00000538475 GUCD1Q96NT3 240 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 OR2D2Q9H210 308 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 SH2D2AQ9NP31 389 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 TMEM38BQ9NVV0 291 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 KLRF1Q9NZS2 232 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 WASHC3Q9Y3C0 194 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 MPC1Q9Y5U8 109 aa5.56□□□□□ -1.52
USP28-207ENST00000538475 TET2Q6N021 2002 aaPredicted RBP5.56□□□□□ -1.52
USP28-207ENST00000538475 DYSFO75923 2080 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 A0A1W2PRE2 83 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 OR4C46A6NHA9 309 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 C9orf118A6NHY6 69 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 K7EN84 100 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 M0R296 226 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 PRKNO60260 465 aaPredicted RBP5.55□□□□□ -1.52
USP28-207ENST00000538475 ZFAND5O76080 213 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 IGLV2-14P01704 120 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 LIPFP07098 398 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 OR9G9P0C7N8 305 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 ARL14EPLP0DKL9 152 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 BCL3P20749 454 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 USF1P22415 310 aaPredicted RBP5.55□□□□□ -1.52
USP28-207ENST00000538475 GPR6P46095 362 aaPredicted RBP5.55□□□□□ -1.52
USP28-207ENST00000538475 PPOXP50336 477 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 MRPS21P82921 87 aaKnown RBP5.55□□□□□ -1.52
USP28-207ENST00000538475 PLGLB1Q02325 96 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 TFF3Q07654 80 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 MAJINQ3KP22 176 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 MPV17L2Q567V2 206 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 TMEM196Q5HYL7 178 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 SPATA46Q5T0L3 261 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 C1orf185Q5T7R7 199 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms