RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 HINT2Q9BX68 163 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 H0YJW9 148 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 J3QR06 171 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 PLAUP00749 431 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 CA2P00918 260 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 HABP2Q14520 560 aaPredicted RBP12.78□□□□□ -0.36
MKS1-204ENST00000537529 TMEM155Q4W5P6 130 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 ZNF596Q8TC21 504 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 MGST2Q99735 147 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 TMPRSS5Q9H3S3 457 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 NPVFQ9HCQ7 196 aa12.78□□□□□ -0.36
MKS1-204ENST00000537529 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.36
MKS1-204ENST00000537529 DLX6P56179 175 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 CD81P60033 236 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 OR5AN1Q8NGI8 311 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 TMEM186Q96B77 213 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 HARBI1Q96MB7 349 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 GGTLC1Q9BX51 225 aa12.77□□□□□ -0.36
MKS1-204ENST00000537529 HCFC1P51610 2035 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 hCG_1809904A0A1W2PP81 198 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 A0A1W2PR64 198 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 A0A1W2PRV1 198 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 CXorf65A6NEN9 183 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 SRRM4A7MD48 611 aaKnown RBP12.77□□□□□ -0.37
MKS1-204ENST00000537529 TMEM250H0YL14 139 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 TMEM177Q53S58 311 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 MUC15Q8N387 334 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 OR5B3Q8NH48 314 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 RAB1CQ92928 201 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 MALSU1Q96EH3 234 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 NEIL1Q96FI4 390 aaPredicted RBP12.77□□□□□ -0.37
MKS1-204ENST00000537529 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 SPTBN2O15020 2390 aa12.77□□□□□ -0.37
MKS1-204ENST00000537529 A0A1W2PPV4 95 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 FNDC10F2Z333 226 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 MYOD1P15172 320 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 PLA2G5P39877 138 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 TMEM249Q2WGJ8 235 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 C2CD4CQ8TF44 421 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 LSM4Q9Y4Z0 139 aaKnown RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 PTPRQQ9UMZ3 2332 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 A0A087X0M5 115 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 TEX50A0A1B0GTY4 177 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 A0A1B0GX30 115 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 YIF1AO95070 293 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 GRNP28799 593 aaKnown RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 RAB31Q13636 194 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 ZNF672Q499Z4 452 aaPredicted RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 WDR25Q64LD2 544 aaPredicted RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 PDPNQ86YL7 162 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 OR9G1Q8NH87 305 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 FLYWCH2Q96CP2 140 aaKnown RBP12.76□□□□□ -0.37
MKS1-204ENST00000537529 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
MKS1-204ENST00000537529 ICE1Q9Y2F5 2266 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 AGAP20933 346 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 IL3RAP26951 378 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 REG1BP48304 166 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 ADORA2A-AS1P86434 159 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 GCSAMLQ5JQS6 135 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 MIC13Q5XKP0 118 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 TEPPQ6URK8 271 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 NABP2Q9BQ15 211 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 NAT8Q9UHE5 227 aa12.75□□□□□ -0.37
MKS1-204ENST00000537529 KLF2Q9Y5W3 355 aaPredicted RBP12.75□□□□□ -0.37
MKS1-204ENST00000537529 SIAH2O43255 324 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 FSTL3O95633 263 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 IGHV1-8P0DP01 117 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 ZNF137PP52743 207 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 OR4C13Q8NGP0 309 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 OR4A5Q8NH83 315 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 VSTM2AQ8TAG5 236 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 OR4F4Q96R69 305 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 PCGF1Q9BSM1 259 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 PAGE4O60829 102 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 DEFA4P12838 97 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 PPOXP50336 477 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 CYP2G1PQ6ZSU1 146 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 ST6GALNAC6Q969X2 333 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 PATZ1Q9HBE1 687 aaKnown RBP12.74□□□□□ -0.37
MKS1-204ENST00000537529 RALYQ9UKM9 306 aaKnown RBP12.74□□□□□ -0.37
MKS1-204ENST00000537529 PRELID1Q9Y255 219 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 WASHC3Q9Y3C0 194 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 DOCK11Q5JSL3 2073 aa12.74□□□□□ -0.37
MKS1-204ENST00000537529 OPN1MWP04001 364 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 OPN1MW2P0DN77 364 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 OPN1MW3P0DN78 364 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 USF1P22415 310 aaPredicted RBP12.73□□□□□ -0.37
MKS1-204ENST00000537529 B2MP61769 119 aa12.73□□□□□ -0.37
MKS1-204ENST00000537529 RPL8P62917 257 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms