RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 SMR3AQ99954 134 aa9.71□□□□□ -0.85
CHRNB1-202ENST00000536404 PRRG4Q9BZD6 226 aa9.71□□□□□ -0.85
CHRNB1-202ENST00000536404 ZNF430Q9H8G1 570 aaPredicted RBP9.71□□□□□ -0.85
CHRNB1-202ENST00000536404 SLC39A9Q9NUM3 307 aa9.71□□□□□ -0.85
CHRNB1-202ENST00000536404 BEX4Q9NWD9 120 aaPredicted RBP9.71□□□□□ -0.85
CHRNB1-202ENST00000536404 ELOVL5Q9NYP7 299 aa9.71□□□□□ -0.85
CHRNB1-202ENST00000536404 PRR14LQ5THK1 2151 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 CXCL13O43927 109 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 KBTBD11O94819 623 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 TYMSP04818 313 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 TPPP2P59282 170 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 Q6ZPA2 131 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 OR10D3Q8NH80 312 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 HS3ST6Q96QI5 342 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 BET1LQ9NYM9 111 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 PRSS50Q9UI38 385 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 FUT9Q9Y231 359 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 MPC1Q9Y5U8 109 aa9.71□□□□□ -0.86
CHRNB1-202ENST00000536404 LOC105371242A0A075B767 164 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 IGHV2OR16-5A0A0B4J2B6 119 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 IGKV1D-13A0A0B4J2D9 117 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 H7BYZ3 331 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 ZNF737O75373 536 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 TOX4O94842 621 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 VENTXO95231 258 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 HLA-HP01893 362 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 LOXP28300 417 aaPredicted RBP9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 SRP14P37108 136 aaKnown RBP9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 MEF2BQ02080 365 aaPredicted RBP9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 KCNIP4Q6PIL6 250 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 VHLLQ6RSH7 139 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 LCN15Q6UWW0 184 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 TOMM20LQ6UXN7 152 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 FAM214BQ7L5A3 538 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 TCF24Q7RTU0 167 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 CENPVQ7Z7K6 275 aaPredicted RBP9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 KLHDC1Q8N7A1 406 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 ZBTB34Q8NCN2 500 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 MRPL30Q8TCC3 161 aaKnown RBP9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 PKIBQ9C010 78 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 WDR61Q9GZS3 305 aaKnown RBP9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 ZNF665Q9H7R5 613 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 UBTD1Q9HAC8 227 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 PLSCR4Q9NRQ2 329 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 TMEM106BQ9NUM4 274 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 IL19Q9UHD0 177 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 WIPI2Q9Y4P8 454 aa9.7□□□□□ -0.86
CHRNB1-202ENST00000536404 ANKRD30BLA7E2S9 258 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 KIAA1324LA8MWY0 1029 aaPredicted RBP9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 THBDP07204 575 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 TNFSF4P23510 183 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 LCN2P80188 198 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 TMEM267Q0VDI3 215 aaPredicted RBP9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 PDCD1Q15116 288 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 MSMO1Q15800 293 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 PRSS8Q16651 343 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 BSXQ3C1V8 233 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 KRTAP21-3Q3LHN1 58 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 WDR25Q64LD2 544 aaPredicted RBP9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 Q71RC1 249 aaPredicted RBP9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 Q8IYB0 196 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 LHX4Q969G2 390 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 RFNGQ9Y644 331 aa9.69□□□□□ -0.86
CHRNB1-202ENST00000536404 DNHD1Q96M86 4753 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 IGKV3D-15A0A087WSY6 115 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 SS18L1O75177 396 aaPredicted RBP9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 MRPL33O75394 65 aaKnown RBP9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 HRASP01112 189 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 GPM6AP51674 278 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 GNG3P63215 75 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 OR5B3Q8NH48 314 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 GMPPAQ96IJ6 420 aaPredicted RBP9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 RSG1Q9BU20 258 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 OR51I2Q9H344 312 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 LAMP3Q9UQV4 416 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 DSCAMO60469 2012 aa9.68□□□□□ -0.86
CHRNB1-202ENST00000536404 ZANQ9Y493 2812 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 IGKV1-6A0A0C4DH72 117 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 SMPD2O60906 423 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 NDUFB8O95169 186 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 PATE4P0C8F1 98 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 PSG2P11465 335 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 GALR1P47211 349 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 RHOGP84095 191 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 PLP2Q04941 152 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 P2RY6Q15077 328 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 ADIRFQ15847 76 aa9.67□□□□□ -0.86
CHRNB1-202ENST00000536404 PRR27Q6MZM9 219 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms