RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 A0A1W2PS18 150 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 DNAJC9-AS1A6NH13 148 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 LINC01548A6NM66 108 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 OR4C45A6NMZ5 311 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 INAFM1C9JVW0 142 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 CECR9P0C854 216 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 RPL7P18124 248 aaKnown RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 IL1RNP18510 177 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 RPS3P23396 243 aaKnown RBP eCLIP3.47□□□□□ -1.853e-8■■■□□ 17.8
GYPA-211ENST00000535709 POLR2HP52434 150 aaKnown RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 RPS23P62266 143 aaKnown RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 SNRPD2P62316 118 aaKnown RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 HLA-DRB3P79483 266 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 LOXL1Q08397 574 aaPredicted RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 ARFRP1Q13795 201 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 JOSD1Q15040 202 aaPredicted RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 CCSMST1Q4G0I0 132 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 CGB2Q6NT52 195 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 ZNF343Q6P1L6 599 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 PRSS54Q6PEW0 395 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 ARL9Q6T311 187 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 TEX43Q6ZNM6 134 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 SLC25A45Q8N413 288 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 TSTD1Q8NFU3 115 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 OR10AD1Q8NGE0 317 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 SFT2D1Q8WV19 159 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 FAM3DQ96BQ1 224 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 CMBLQ96DG6 245 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 IFI27L2Q9H2X8 130 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 TCEAL2Q9H3H9 227 aaPredicted RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 MOB1AQ9H8S9 216 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 MRPL16Q9NX20 251 aaKnown RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 FBXL12Q9NXK8 326 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 ZNF629Q9UEG4 869 aaPredicted RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 SIGLEC7Q9Y286 467 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 LAMTOR2Q9Y2Q5 125 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 PCM1Q15154 2024 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 COL27A1Q8IZC6 1860 aaPredicted RBP3.47□□□□□ -1.85
GYPA-211ENST00000535709 GON4LQ3T8J9 2241 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 A0A0C4DFX4 3053 aa3.47□□□□□ -1.85
GYPA-211ENST00000535709 DUXBA0A1W2PPF3 345 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 ZNF850A8MQ14 1090 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 INMT-MINDY4F8WBC2 141 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 M0R143 59 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 ZNF354AO60765 605 aaPredicted RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 DHRS3O75911 302 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 IGLL1P15814 213 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 CTLA4P16410 223 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 ZNF30P17039 623 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 RPS4Y1P22090 263 aaKnown RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 LHX2P50458 406 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 CTBP2P56545 445 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 NCS1P62166 190 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 HIST1H1AQ02539 215 aaPredicted RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 PAX8Q06710 450 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 Q0VFX4 171 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 NEDD8Q15843 81 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 TIMM50Q3ZCQ8 353 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 C1orf100Q5SVJ3 147 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 GLYATQ6IB77 296 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 LCN8Q6JVE9 175 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 SCIMPQ6UWF3 145 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 TEX261Q6UWH6 196 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 IL34Q6ZMJ4 242 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 RPS27LQ71UM5 84 aaKnown RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 VN1R4Q7Z5H5 301 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 ZNF441Q8N8Z8 693 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 TMEM229BQ8NBD8 167 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 LY6G5BQ8NDX9 201 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 OR2T4Q8NH00 348 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 OR51H1Q8NH63 302 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 CCL4L1Q8NHW4 92 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 VN1R17PQ8TDU5 208 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 ADAT3Q96EY9 351 aaPredicted RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 SLC35E1Q96K37 410 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 TP53RKQ96S44 253 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 ZNF471Q9BX82 626 aaPredicted RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 EIF5A2Q9GZV4 153 aaKnown RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 SLC25A31Q9H0C2 315 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 OR52D1Q9H346 318 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 SRMSQ9H3Y6 488 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 MED11Q9P086 117 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 DHCR7Q9UBM7 475 aaKnown RBP3.46□□□□□ -1.86
GYPA-211ENST00000535709 ZNF318Q5VUA4 2279 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 VPS13AQ96RL7 3174 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 SPEGQ15772 3267 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 PI4KAP42356 2102 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 SDK1Q7Z5N4 2213 aa3.46□□□□□ -1.86
GYPA-211ENST00000535709 IGHV1OR15-1A0A075B7D0 117 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 IGHV3-38A0A0C4DH36 116 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 TMEM269A0A1B0GVZ9 245 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 C5orf63A6NC05 138 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 RIIAD1A6NNX1 92 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 KNCNA6PVL3 124 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 K7EQG2 157 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 M0R2Z0 102 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 UPK1AO00322 258 aa3.45□□□□□ -1.86
GYPA-211ENST00000535709 UBFD1O14562 309 aaKnown RBP3.45□□□□□ -1.86
GYPA-211ENST00000535709 ZNF207O43670 478 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms