RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 IGKV1-5P01602 117 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 IGLV1-51P01701 117 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 CD74P04233 296 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 CRYGCP07315 174 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 CSN3P07498 182 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 OR8U8P0C7N1 319 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 P0C879 139 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 HLA-GP17693 338 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 F2RP25116 425 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 RCVRNP35243 200 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 G6PCP35575 357 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 ECI1P42126 302 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 LPAR6P43657 344 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 HERV-K104P61576 105 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 DEFB121Q5J5C9 76 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 VAX1Q5SQQ9 334 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 PYHIN1Q6K0P9 492 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 TBC1D26Q86UD7 250 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 ZBTB34Q8NCN2 500 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 OR13C8Q8NGS7 320 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 LHFPL5Q8TAF8 219 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 DPF1Q92782 380 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 ISOC1Q96CN7 298 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 DGCR14Q96DF8 476 aaKnown RBP3.85□□□□□ -1.79
USH1C-210ENST00000534556 SEC22AQ96IW7 307 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 FYTTD1Q96QD9 318 aaKnown RBP3.85□□□□□ -1.79
USH1C-210ENST00000534556 TP53RKQ96S44 253 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 THAP7Q9BT49 309 aaPredicted RBP3.85□□□□□ -1.79
USH1C-210ENST00000534556 SLA2Q9H6Q3 261 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 SCPEP1Q9HB40 452 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 SLC2A9Q9NRM0 540 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 ZNF355PQ9NSJ1 428 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 TMEM140Q9NV12 185 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 RYR2Q92736 4967 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 C13orf42A0A1B0GVH6 325 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 MARCH11A6NNE9 402 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 NPIPB5A8MRT5 1133 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 GABARAPH6UMI1 98 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 GPR31O00270 319 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 HPRT1P00492 218 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 HRASP01112 189 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 KRASP01116 189 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 NQO2P16083 231 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 PSMB6P28072 239 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 TNFSF8P32971 234 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 KIR2DS2P43631 304 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 RPL5P46777 297 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 PPP5CP53041 499 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 TMBIM6P55061 237 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 UCP3P55916 312 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 SYNJ2BPP57105 145 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 TAS2R31P59538 309 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 TAS2R46P59540 309 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 RPL8P62917 257 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 CBX3Q13185 183 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 EXOSC2Q13868 293 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 ZNF79Q15937 498 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 SP6Q3SY56 376 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 Q6ZRM9 215 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 TMEM229BQ8NBD8 167 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 OR4C16Q8NGL9 310 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 OR6F1Q8NGZ6 308 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 MARCH1Q8TCQ1 289 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 SMIM4Q8WVI0 70 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 CACNG8Q8WXS5 425 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 TMEM68Q96MH6 324 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 PHB2Q99623 299 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 SPIN2AQ99865 258 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 ASCL2Q99929 193 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 SPIN2BQ9BPZ2 258 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 RTBDNQ9BSG5 229 aaPredicted RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 MCRIP2Q9BUT9 160 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 PLEKHA2Q9HB19 425 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 ZC4H2Q9NQZ6 224 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 NDUFA4L2Q9NRX3 87 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 PRR13Q9NZ81 148 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 CCDC59Q9P031 241 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 PEF1Q9UBV8 284 aaKnown RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 FBXL7Q9UJT9 491 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 ZNF256Q9Y2P7 627 aaPredicted RBP3.84□□□□□ -1.79
USH1C-210ENST00000534556 ZNF257Q9Y2Q1 563 aa3.84□□□□□ -1.79
USH1C-210ENST00000534556 BIRC6Q9NR09 4857 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 HYDINQ4G0P3 5121 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 IGHV3-21A0A0B4J1V1 117 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 A0A0B4J293 547 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 IGHV3-35A0A0C4DH35 117 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 SMIM31A0A1B0GVY4 71 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 FAM223BA6NKX1 122 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 ZNF785A8K8V0 405 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 K7EIM0 57 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 MPPED1O15442 326 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 RGS5O15539 181 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 SAP30O75446 220 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 OR2C1O95371 312 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 IGHV3-48P01763 117 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 GP9P14770 177 aa3.83□□□□□ -1.8
USH1C-210ENST00000534556 PTBP1P26599 531 aaKnown RBP eCLIP3.83□□□□□ -1.8
USH1C-210ENST00000534556 MAS1LP35410 378 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms