RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NAT8BQ9UHF3 227 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 A0A1W2PNU3 283 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-210ENST00000534405 SLC17A3O00476 420 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 MAGEA5P43359 124 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 SPANXN5Q5MJ07 72 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 LSM10Q969L4 123 aaKnown RBP15.99■□□□□ 0.15
SMPD1-210ENST00000534405 GUCD1Q96NT3 240 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 FAM173AQ9BQD7 235 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-210ENST00000534405 GPR179Q6PRD1 2367 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 A0A1B0GV72 72 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 CDIPTO14735 213 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 RPEL1Q2QD12 228 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 UFSP1Q6NVU6 142 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 TMEM14EPQ6UXP3 125 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 RDH5Q92781 318 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 HES4Q9HCC6 221 aa15.99■□□□□ 0.15
SMPD1-210ENST00000534405 FAM186AA6NE01 2351 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 GOSR1O95249 250 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 CELA3BP08861 270 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 FGF12P61328 243 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 PSG7Q13046 419 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 COX19Q49B96 90 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 SCCPDHQ8NBX0 429 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 CD300LBA8K4G0 201 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 SYNGR1O43759 233 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 GPR6P46095 362 aaPredicted RBP15.98■□□□□ 0.15
SMPD1-210ENST00000534405 TMEM136Q6ZRR5 245 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 MRPL21Q7Z2W9 205 aaKnown RBP15.98■□□□□ 0.15
SMPD1-210ENST00000534405 MMD2Q8IY49 270 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 C5orf17Q8NAS9 161 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 OR8B3Q8NGG8 313 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 OR1N2Q8NGR9 330 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 SLC25A40Q8TBP6 338 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 OR8B2Q96RD0 313 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 TXNDC17Q9BRA2 123 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 ST20Q9HBF5 79 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 MED13Q9UHV7 2174 aa15.98■□□□□ 0.15
SMPD1-210ENST00000534405 IGKV1-6A0A0C4DH72 117 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 LINC00869P0C866 280 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 SELENOVP59797 346 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 HTD2P86397 168 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 C3AR1Q16581 482 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 SRSF7Q16629 238 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMPD1-210ENST00000534405 CEACAM21Q3KPI0 293 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 ZNF439Q8NDP4 499 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 TECTAO75443 2155 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 TNRC6AQ8NDV7 1962 aaKnown RBP15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A10PA6NDY2 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A18PA6NE21 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A16PA6NEW6 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A20PA6NIJ5 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A8PA6NJQ4 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A7PA6NKC0 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A22PA8MWA6 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A12PA8MX19 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A5PA8MXJ8 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A23PA8MXZ1 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 SERPINE2P07093 398 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A15PP0C7V4 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A13PP0C7W8 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A14PP0C7W9 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 FAM90A24PP0C7X0 464 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 NTF3P20783 257 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 RNFT1Q5M7Z0 435 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 ZDHHC23Q8IYP9 409 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 ZNF488Q96MN9 340 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 TTTY12Q9BZ98 90 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 KMT2EQ8IZD2 1858 aa15.97■□□□□ 0.15
SMPD1-210ENST00000534405 GNG7O60262 68 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 SS18L1O75177 396 aaPredicted RBP15.96■□□□□ 0.15
SMPD1-210ENST00000534405 CGAP01215 116 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 SRIP30626 198 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 SCGB2A2Q13296 93 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 KIAA1644Q3SXP7 199 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 Q56UQ5 140 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 TMEM147Q9BVK8 224 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 OR51B2Q9Y5P1 312 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 DOCK11Q5JSL3 2073 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 FAM181BA6NEQ2 426 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 GAGE10A6NGK3 116 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 BMPR1BO00238 502 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 PSG2P11465 335 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 OR1C1Q15619 314 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 ABHD17BQ5VST6 288 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 EBLN2Q6P2I7 272 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 C20orf204Q6ZNR8 217 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 NEGR1Q7Z3B1 354 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 OR1K1Q8NGR3 316 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 NINJ1Q92982 152 aa15.96■□□□□ 0.15
SMPD1-210ENST00000534405 K7EN84 100 aa15.95■□□□□ 0.14
SMPD1-210ENST00000534405 LINC00696Q6ZRV3 163 aa15.95■□□□□ 0.14
SMPD1-210ENST00000534405 POM121L2Q96KW2 1035 aa15.95■□□□□ 0.14
SMPD1-210ENST00000534405 PSG11Q9UQ72 335 aa15.95■□□□□ 0.14
SMPD1-210ENST00000534405 OR8I2Q8N0Y5 310 aa15.95■□□□□ 0.14
SMPD1-210ENST00000534405 TMEM251Q8N6I4 163 aa15.95■□□□□ 0.14
SMPD1-210ENST00000534405 IGKV1-39P01597 117 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 IGKV1D-39P04432 117 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 S100GP29377 79 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 UBE2G1P62253 170 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms