RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	FYTTD1	Q96QD9	318 aa	Known RBP	11.22	□□□□□ -0.61
CTSB-231	ENST00000534382	SLC2A9	Q9NRM0	540 aa		11.22	□□□□□ -0.61
CTSB-231	ENST00000534382	IGHV4OR15-8	A0A075B7B6	117 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382		A0A087WW49	117 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	TRAV3	A0A0B4J244	114 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382		A0A1B0GW64	132 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	MARCH11	A6NNE9	402 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	FGF2	P09038	288 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	RPA2	P15927	270 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	RND3	P61587	244 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	SCGB2B2	Q4G0G5	96 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	DCUN1D4	Q92564	292 aa		11.21	□□□□□ -0.61
CTSB-231	ENST00000534382	TRBV9	A0A0B4J1U6	114 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	DPPA5	A6NC42	116 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	NPIPB5	A8MRT5	1133 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	KRAS	P01116	189 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	PRH1	P02810	166 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	AKAIN1	P0CW23	69 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	MYOD1	P15172	320 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	PI3	P19957	117 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	PTBP1	P26599	531 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	HOXD3	P31249	432 aa	Predicted RBP	11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	S100A5	P33763	92 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	G6PC	P35575	357 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	PIGP	P57054	158 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	DEFA5	Q01523	94 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	EGFEM1P	Q0D2K5	195 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	C9orf66	Q5T8R8	295 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	ZFAND1	Q8TCF1	268 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	DLX4	Q92988	240 aa	Predicted RBP	11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	COMMD5	Q9GZQ3	224 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	ZNF257	Q9Y2Q1	563 aa		11.2	□□□□□ -0.62
CTSB-231	ENST00000534382	ANKRD20A5P	A0PJZ0	165 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	CGB1	A6NKQ9	187 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	FAM223B	A6NKX1	122 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	SEC14L6	B5MCN3	397 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	DISC1	C4P0D8	188 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	RBMXL2	O75526	392 aa	Known RBP	11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	CRYGC	P07315	174 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	AREG	P15514	252 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	PPP5C	P53041	499 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	SLURP1	P55000	103 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	OR2B8P	P59922	312 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	KRTAP10-11	P60412	298 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	RHOG	P84095	191 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	ZNF45	Q02386	682 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	FAAP20	Q6NZ36	180 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	ZNF343	Q6P1L6	599 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	FAM223A	Q8IWN6	122 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	OR4C16	Q8NGL9	310 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	SRSF8	Q9BRL6	282 aa	Known RBP	11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	RANGRF	Q9HD47	186 aa	Predicted RBP	11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	AKIP1	Q9NQ31	210 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	BOLA1	Q9Y3E2	137 aa		11.19	□□□□□ -0.62
CTSB-231	ENST00000534382	ANKRD34B	A5PLL1	514 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	OVOL1	O14753	267 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	SNAPC5	O75971	98 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	SERPINE2	P07093	398 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	CTRB1	P17538	263 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	PSMB6	P28072	239 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	ECI1	P42126	302 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	ATP5G2	Q06055	141 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	CTRB2	Q6GPI1	263 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	NECAP1	Q8NC96	275 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	OR13C8	Q8NGS7	320 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	MARCH1	Q8TCQ1	289 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	MRGPRF	Q96AM1	343 aa		11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	THAP7	Q9BT49	309 aa	Predicted RBP	11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	ZMAT5	Q9UDW3	170 aa	Known RBP	11.18	□□□□□ -0.62
CTSB-231	ENST00000534382	TEX50	A0A1B0GTY4	177 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382		H0Y980	276 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	OR2J3	O76001	311 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	DHFR	P00374	187 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	IGKV1-39	P01597	117 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	IGKV1D-39	P04432	117 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	CTSD	P07339	412 aa	Predicted RBP	11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	ZP3	P21754	424 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	INSL3	P51460	131 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	SURF2	Q15527	256 aa	Predicted RBP	11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	PYDC2	Q56P42	97 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	CCDC190	Q86UF4	302 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	CCDC71L	Q8N9Z2	235 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	OR1L8	Q8NGR8	309 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	SEC22A	Q96IW7	307 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	TP53RK	Q96S44	253 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	TSC22D3	Q99576	134 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	PRRT1	Q99946	306 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	QTRT1	Q9BXR0	403 aa	Known RBP	11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	NDUFA13	Q9P0J0	144 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	COPZ2	Q9P299	210 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	PEF1	Q9UBV8	284 aa	Known RBP	11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	NSG2	Q9Y328	171 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382		V9GYH0	126 aa		11.17	□□□□□ -0.62
CTSB-231	ENST00000534382	C3orf85	A0A1B0GTC6	90 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	IGLC7	A0M8Q6	106 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	TRAPPC2	P0DI81	140 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	TRAPPC2B	P0DI82	140 aa		11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	EXOSC2	Q13868	293 aa	Known RBP	11.16	□□□□□ -0.62
CTSB-231	ENST00000534382	KLK9	Q2XQG4	91 aa		11.16	□□□□□ -0.62

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