RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 BET1LQ9NYM9 111 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 RABL2AQ9UBK7 228 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-219ENST00000533953 RABL2BQ9UNT1 228 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 MEGF8Q7Z7M0 2845 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 ZNF45Q02386 682 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 KLF9Q13886 244 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-219ENST00000533953 POU2AF1Q16633 256 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 OR10W1Q8NGF6 305 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 COMMD9Q9P000 198 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 NDUFA13Q9P0J0 144 aa10.36□□□□□ -0.75
CMTM1-219ENST00000533953 IGHV4OR15-8A0A075B7B6 117 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 A0A087WW49 117 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 TEX50A0A1B0GTY4 177 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 ANKRD34BA5PLL1 514 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 MARCH11A6NNE9 402 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 CREBL2O60519 120 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-219ENST00000533953 CTSDP07339 412 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-219ENST00000533953 S100GP29377 79 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 CD40LGP29965 261 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-219ENST00000533953 SLURP1P55000 103 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 OR2B8PP59922 312 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 ERVK-16P61578 105 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 RND3P61587 244 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 BAK1Q16611 211 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 BEAN1Q3B7T3 259 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 OR4A5Q8NH83 315 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 SPIN2AQ99865 258 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 SPIN2BQ9BPZ2 258 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 SRRQ9GZT4 340 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 C5orf66Q9H5L9 145 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 PRR13Q9NZ81 148 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 COPZ2Q9P299 210 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 S4R3C0 116 aa10.35□□□□□ -0.75
CMTM1-219ENST00000533953 C3orf85A0A1B0GTC6 90 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 LINC00854A0A1B0GVQ3 168 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 A6NHS1 94 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 OR2J3O76001 311 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 TRBV12-3P01733 135 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
CMTM1-219ENST00000533953 MAS1LP35410 378 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 ETV6P41212 452 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 SPANXN2Q5MJ10 180 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 TTC9CQ8N5M4 171 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 DPF1Q92782 380 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 SEC22AQ96IW7 307 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 TMEM68Q96MH6 324 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
CMTM1-219ENST00000533953 AIFM2Q9BRQ8 373 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 SLA2Q9H6Q3 261 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 AKIP1Q9NQ31 210 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 GPR132Q9UNW8 380 aa10.34□□□□□ -0.75
CMTM1-219ENST00000533953 C13orf42A0A1B0GVH6 325 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 NDUFB8O95169 186 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 IGKV1-5P01602 117 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 SERPINE2P07093 398 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 SLC6A1P30531 599 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 RHOGP84095 191 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 RUNX1Q01196 453 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 ZNF616Q08AN1 781 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 FHL3Q13643 280 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 TOMM5Q8N4H5 51 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 DCUN1D4Q92564 292 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-219ENST00000533953 ZNF486Q96H40 463 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-219ENST00000533953 COMMD5Q9GZQ3 224 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 C14orf166Q9Y224 244 aaKnown RBP10.33□□□□□ -0.76
CMTM1-219ENST00000533953 OR51B2Q9Y5P1 312 aa10.33□□□□□ -0.76
CMTM1-219ENST00000533953 TEX13DA0A0J9YY54 714 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-219ENST00000533953 IGLC7A0M8Q6 106 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 H0Y980 276 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 H3BUA1 57 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 SNAPC5O75971 98 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 IGHV3-23P01764 117 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 PSMB6P28072 239 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 TRIM16LQ309B1 348 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 ZNF57Q68EA5 555 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-219ENST00000533953 H2BFWTQ7Z2G1 175 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 LHFPL5Q8TAF8 219 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 TMEM230Q96A57 120 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 FANCD2OSQ96PS1 177 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 PRRT1Q99946 306 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 FBXL7Q9UJT9 491 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 DMRT1Q9Y5R6 373 aa10.32□□□□□ -0.76
CMTM1-219ENST00000533953 TRBV9A0A0B4J1U6 114 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 A0A0G2JRQ6 117 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 LINC01619G3V211 115 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 WIPF1O43516 503 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 HSPB1P04792 205 aaKnown RBP10.31□□□□□ -0.76
CMTM1-219ENST00000533953 TRAPPC2P0DI81 140 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 TRAPPC2BP0DI82 140 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 CTRB1P17538 263 aa10.31□□□□□ -0.76
CMTM1-219ENST00000533953 PTBP1P26599 531 aaKnown RBP eCLIP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms