RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SSMEM1Q8WWF3 244 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 MSL2Q9HCI7 577 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 C15orf61A6NNL5 157 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 ITGB1BP1O14713 200 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 MGST3O14880 152 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 CRISP2P16562 243 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 HNF1AP20823 631 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 RANP62826 216 aaKnown RBP13.71□□□□□ -0.21
CTSB-228ENST00000533455 SPATA31B1PQ5VZV4 182 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 TEPPQ6URK8 271 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 VKORC1L1Q8N0U8 176 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 STPG3Q8N7X2 389 aa13.71□□□□□ -0.21
CTSB-228ENST00000533455 EAF1Q96JC9 268 aaPredicted RBP13.71□□□□□ -0.21
CTSB-228ENST00000533455 IGKV1D-17A0A075B6S4 117 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 TRBV9A0A0B4J1U6 114 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 A8MXE2 369 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 FNDC10F2Z333 226 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 CECR9P0C854 216 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 Q0VG73 95 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 OR4S2Q8NH73 311 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 PPP1R35Q8TAP8 253 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.22
CTSB-228ENST00000533455 SLC25A10Q9UBX3 287 aaPredicted RBP13.71□□□□□ -0.22
CTSB-228ENST00000533455 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.22
CTSB-228ENST00000533455 ZDBF2Q9HCK1 2354 aa13.71□□□□□ -0.22
CTSB-228ENST00000533455 SRRM5B3KS81 715 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 M0QZK8 103 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 TNFSF13O75888 250 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 IGHG3P01860 377 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 NPY1RP25929 384 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 PRR20EP86478 221 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 PRR20CP86479 221 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 PRR20DP86480 221 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 PRR20BP86481 221 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 PRR20AP86496 221 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 TMPRSS7Q7RTY8 843 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 OR1L6Q8NGR2 347 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 SFXN3Q9BWM7 321 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 FAM234AQ9H0X4 552 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 FZR1Q9UM11 496 aa13.7□□□□□ -0.22
CTSB-228ENST00000533455 SLC17A3O00476 420 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 SERF1AO75920 110 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 IGLV1-44P01699 117 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 FABP6P51161 128 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 ZNF134P52741 427 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 RAB31Q13636 194 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 TRIB1Q96RU8 372 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 OR10J4P0C629 311 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 TNFSF10P50591 281 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 C1orf174Q8IYL3 243 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 PLPPR2Q96GM1 343 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 DUSP13Q9UII6 198 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 V9GYV3 84 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 BDP1A6H8Y1 2624 aa13.69□□□□□ -0.22
CTSB-228ENST00000533455 RAB7AP51149 207 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 HSPE1P61604 102 aaKnown RBP13.68□□□□□ -0.22
CTSB-228ENST00000533455 KRTCAP3Q53RY4 240 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 MMD2Q8IY49 270 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.68□□□□□ -0.22
CTSB-228ENST00000533455 NEUROG1Q92886 237 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 FOXH1O75593 365 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 CFHR2P36980 270 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 KIR2DL2P43627 348 aaPredicted RBP13.68□□□□□ -0.22
CTSB-228ENST00000533455 OR4P4Q8NGL7 312 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 CORO2AQ92828 525 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 MIEN1Q9BRT3 115 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 GNB1LQ9BYB4 327 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
CTSB-228ENST00000533455 FCN1O00602 326 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 CA2P00918 260 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 LINC00869P0C866 280 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
CTSB-228ENST00000533455 CNEP1R1Q8N9A8 125 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 PARD6AQ9NPB6 346 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 TMEM167BQ9NRX6 74 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
CTSB-228ENST00000533455 SNURFLB1AK76 121 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 CGB3P0DN86 165 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 CGB7P0DN87 165 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 IGFBP2P18065 325 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 IER3P46695 156 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 POU2AF1Q16633 256 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 TMEM183BQ1AE95 376 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 ATP1A1-AS1Q5TC04 95 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 ARRDC1-AS1Q9H2J1 176 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 IGHV1-18A0A0C4DH31 117 aa13.66□□□□□ -0.22
CTSB-228ENST00000533455 LNP1A1A4G5 178 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms