RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 NEIL2Q969S2 332 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 PLEKHB2Q96CS7 222 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 PGLYRP3Q96LB9 341 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 LINC01600Q96MT4 127 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 OR8B2Q96RD0 313 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 TXNDC17Q9BRA2 123 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 IMUPQ9GZP8 106 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 CST11Q9H112 138 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 KCNK15Q9H427 330 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 PROCRQ9UNN8 238 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 TCF19Q9Y242 345 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 VSIG4Q9Y279 399 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 V9GY05 133 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 KCPQ6ZWJ8 1503 aa4.54□□□□□ -1.68
CD44-236ENST00000533222 TRAV5A0A0B4J249 113 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 PIGBOS1A0A0B4J2F0 54 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 SYS1-DBNDD2H3BUS1 97 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ISLRO14498 428 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 PTGESO14684 152 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ZNF737O75373 536 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ZNF324O75467 553 aaPredicted RBP4.53□□□□□ -1.68
CD44-236ENST00000533222 DEDDO75618 318 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 HPNP05981 417 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 BCL2P10415 239 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ACP5P13686 325 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 NSG1P42857 185 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 RPS24P62847 133 aaKnown RBP4.53□□□□□ -1.68
CD44-236ENST00000533222 CFHR1Q03591 330 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 CXCL9Q07325 125 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ZNF260Q3ZCT1 412 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 KLF17Q5JT82 389 aaPredicted RBP4.53□□□□□ -1.68
CD44-236ENST00000533222 CDC42EP5Q6NZY7 148 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 PAQR6Q6TCH4 344 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 PRSS45Q7RTY3 260 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 ZNF695Q8IW36 515 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 C1orf158Q8N1D5 194 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 TMEM256Q8N2U0 113 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 GATD1Q8NB37 220 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 SUMF1Q8NBK3 374 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 GJC3Q8NFK1 279 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 VN1R2Q8NFZ6 395 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 OR1L8Q8NGR8 309 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 OR10G6Q8NH81 332 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 PIFOQ8TCI5 191 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 WIPF2Q8TF74 440 aaPredicted RBP4.53□□□□□ -1.68
CD44-236ENST00000533222 ST6GALNAC6Q969X2 333 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 RAB37Q96AX2 223 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 RASL11BQ9BPW5 248 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 C16orf70Q9BSU1 422 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 FAM234AQ9H0X4 552 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 INSL5Q9Y5Q6 135 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 NINQ8N4C6 2090 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 NUP205Q92621 2012 aa4.53□□□□□ -1.68
CD44-236ENST00000533222 CPAMD8Q8IZJ3 1885 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 TEX22C9J3V5 150 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 OVOL1O14753 267 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 NPFFO15130 113 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 SOCS1O15524 211 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 CXorf1O96002 111 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 NAPSAO96009 420 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 TTRP02766 147 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 PRH1P02810 166 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 OR5AL1P0C617 328 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 C3orf79P0CE67 100 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 IGLL1P15814 213 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 GABRG2P18507 467 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 VDAC1P21796 283 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 FCGR2CP31995 323 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 PRDX2P32119 198 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 CAMPP49913 170 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 TMEM50BP56557 158 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 PPP1CBP62140 327 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 RPS4XP62701 263 aaKnown RBP4.52□□□□□ -1.69
CD44-236ENST00000533222 ZNF117Q03924 483 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 LAMTOR4Q0VGL1 99 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 FUT5Q11128 374 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 DAZAP2Q15038 168 aaPredicted RBP4.52□□□□□ -1.69
CD44-236ENST00000533222 CD226Q15762 336 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 ZNF74Q16587 644 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 IZUMO4Q1ZYL8 232 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 MEIG1Q5JSS6 88 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 DCAF12Q5T6F0 453 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 TRIM40Q6P9F5 258 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 SSX8Q7RTT4 187 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 RNF144BQ7Z419 303 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 ANKRD37Q7Z713 158 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 ATOH7Q8N100 152 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 RFLNBQ8N5W9 214 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 PTGR2Q8N8N7 351 aaPredicted RBP4.52□□□□□ -1.69
CD44-236ENST00000533222 SMRP1Q8NCR6 262 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 MYOZ3Q8TDC0 251 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 GTSF1Q8WW33 167 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 RASL10AQ92737 203 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 OR2A5Q96R48 311 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 RARRES2Q99969 163 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 BCL2L10Q9HD36 194 aa4.52□□□□□ -1.69
CD44-236ENST00000533222 PCTPQ9UKL6 214 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms