RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 C11orf87Q6NUJ2 197 aa23.16■■□□□ 1.3
SSSCA1-207ENST00000533115 DGCR14Q96DF8 476 aaKnown RBP23.16■■□□□ 1.3
SSSCA1-207ENST00000533115 RSRP1Q9BUV0 290 aa23.16■■□□□ 1.3
SSSCA1-207ENST00000533115 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP23.15■■□□□ 1.3
SSSCA1-207ENST00000533115 GP9P14770 177 aa23.15■■□□□ 1.3
SSSCA1-207ENST00000533115 OR2B8PP59922 312 aa23.15■■□□□ 1.3
SSSCA1-207ENST00000533115 TATDN3Q17R31 274 aa23.15■■□□□ 1.3
SSSCA1-207ENST00000533115 LPCAT3Q6P1A2 487 aa23.15■■□□□ 1.3
SSSCA1-207ENST00000533115 DHFRP00374 187 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 IGLV1-51P01701 117 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 FGF2P09038 288 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 CTRB1P17538 263 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 LPAR6P43657 344 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 ERVK-16P61578 105 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 RNASE12Q5GAN4 147 aaKnown RBP23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 VAX1Q5SQQ9 334 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 CTRB2Q6GPI1 263 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 HAPLN4Q86UW8 402 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 COMMD5Q9GZQ3 224 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 FBXL7Q9UJT9 491 aa23.14■■□□□ 1.29
SSSCA1-207ENST00000533115 MARCH11A6NNE9 402 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 BMPR1BO00238 502 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 TPPPO94811 219 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 RPA2P15927 270 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 SPCS2Q15005 226 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 FAM209BQ5JX69 171 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 IL34Q6ZMJ4 242 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 FCAMRQ8WWV6 532 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 FANCD2OSQ96PS1 177 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 KLK11Q9UBX7 282 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 SMAD5-AS1Q9Y6J3 95 aa23.13■■□□□ 1.29
SSSCA1-207ENST00000533115 REG1AP05451 166 aa23.12■■□□□ 1.29
SSSCA1-207ENST00000533115 KLK9Q2XQG4 91 aa23.12■■□□□ 1.29
SSSCA1-207ENST00000533115 PHLDA2Q53GA4 152 aa23.12■■□□□ 1.29
SSSCA1-207ENST00000533115 CLVS1Q8IUQ0 354 aaPredicted RBP23.12■■□□□ 1.29
SSSCA1-207ENST00000533115 KLK9Q9UKQ9 250 aa23.12■■□□□ 1.29
SSSCA1-207ENST00000533115 M0QYG6 137 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 NHLRC4P0CG21 123 aaPredicted RBP23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 HIST1H1BP16401 226 aaKnown RBP23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 S100GP29377 79 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 UCP3P55916 312 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 ZNF585BQ52M93 769 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 OR52I2Q8NH67 350 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 C15orf40Q8WUR7 153 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 ABHD1Q96SE0 405 aa23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 SRSF8Q9BRL6 282 aaKnown RBP23.11■■□□□ 1.29
SSSCA1-207ENST00000533115 NDUFB8O95169 186 aa23.1■■□□□ 1.29
SSSCA1-207ENST00000533115 DEFA4P12838 97 aa23.1■■□□□ 1.29
SSSCA1-207ENST00000533115 SLC38A6Q8IZM9 456 aa23.1■■□□□ 1.29
SSSCA1-207ENST00000533115 MIXL1Q9H2W2 232 aa23.1■■□□□ 1.29
SSSCA1-207ENST00000533115 IGLC7A0M8Q6 106 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 KRASP01116 189 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 CSN3P07498 182 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 CADM3Q8N126 398 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 RAB2BQ8WUD1 216 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 QTRT1Q9BXR0 403 aaKnown RBP23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 MTFP1Q9UDX5 166 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 DMRT1Q9Y5R6 373 aa23.09■■□□□ 1.29
SSSCA1-207ENST00000533115 RGS5O15539 181 aa23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 IFNA6P05013 189 aa23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 G6PCP35575 357 aa23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 TBC1D26Q86UD7 250 aa23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 FAM212BQ9NTI7 297 aaPredicted RBP23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 SIGLEC8Q9NYZ4 499 aa23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 PEMTQ9UBM1 199 aa23.08■■□□□ 1.29
SSSCA1-207ENST00000533115 IGLV11-55A0A075B6I3 123 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 TEX50A0A1B0GTY4 177 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 PPP5D1E7EU14 171 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 CTDSP2O14595 271 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 CD3DP04234 171 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 TMBIM6P55061 237 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 RNASE10Q5GAN6 216 aaKnown RBP23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 LAX1Q8IWV1 398 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 BCL7BQ9BQE9 202 aa23.07■■□□□ 1.28
SSSCA1-207ENST00000533115 IGHV3-23P01764 117 aa23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 TRAPPC2P0DI81 140 aa23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 TRAPPC2BP0DI82 140 aa23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 TBPP20226 339 aa23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 THOC7Q6I9Y2 204 aaKnown RBP23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 OR10W1Q8NGF6 305 aa23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 EEF1AKMT3Q96AZ1 226 aa23.06■■□□□ 1.28
SSSCA1-207ENST00000533115 GGCTO75223 188 aaKnown RBP23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 ARRDC1Q8N5I2 433 aa23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 OR1L8Q8NGR8 309 aa23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 CCDC140Q96MF4 163 aa23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 ASCL2Q99929 193 aa23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 NSG2Q9Y328 171 aa23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 S4R3C0 116 aa23.05■■□□□ 1.28
SSSCA1-207ENST00000533115 H0Y980 276 aa23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 SNAPC5O75971 98 aa23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 RPL5P46777 297 aaKnown RBP23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 CLEC19AQ6UXS0 136 aa23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 HSD17B13Q7Z5P4 300 aaPredicted RBP23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 LHFPL1Q86WI0 220 aa23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 DYNC2LI1Q8TCX1 351 aa23.04■■□□□ 1.28
SSSCA1-207ENST00000533115 HLA-AP01891 365 aaKnown RBP23.03■■□□□ 1.28
SSSCA1-207ENST00000533115 ARL3P36405 182 aa23.03■■□□□ 1.28
SSSCA1-207ENST00000533115 TMEM229BQ8NBD8 167 aa23.03■■□□□ 1.28
SSSCA1-207ENST00000533115 CXorf58Q96LI9 332 aa23.03■■□□□ 1.28
SSSCA1-207ENST00000533115 NDUFA4L2Q9NRX3 87 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms