RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	ZNF45	Q02386	682 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	EGFEM1P	Q0D2K5	195 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	STEAP1B	Q6NZ63	245 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	LPCAT3	Q6P1A2	487 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	OR4A5	Q8NH83	315 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	DLX4	Q92988	240 aa	Predicted RBP	13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	AIFM2	Q9BRQ8	373 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	COMMD9	Q9P000	198 aa		13.43	□□□□□ -0.26
CTSB-223	ENST00000532370	SEC14L6	B5MCN3	397 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	CTDSPL	O15194	276 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	RAB3D	O95716	219 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	KRAS	P01116	189 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	HSPB1	P04792	205 aa	Known RBP	13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	PGAM2	P15259	253 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	MAS1L	P35410	378 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	G6PC	P35575	357 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	OR2B8P	P59922	312 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	ARRDC1	Q8N5I2	433 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370	SLC2A9	Q9NRM0	540 aa		13.42	□□□□□ -0.26
CTSB-223	ENST00000532370		A0A0G2JLM5	398 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	FABP12	A6NFH5	140 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	MARCH11	A6NNE9	402 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	TRBV12-3	P01733	135 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	PPP5C	P53041	499 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	RHOG	P84095	191 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	SCGB2B2	Q4G0G5	96 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	TERB2	Q8NHR7	220 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	MRGPRF	Q96AM1	343 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	GPR61	Q9BZJ8	451 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	AKIP1	Q9NQ31	210 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	NSG2	Q9Y328	171 aa		13.41	□□□□□ -0.26
CTSB-223	ENST00000532370	TRBV9	A0A0B4J1U6	114 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	IGKV1-39	P01597	117 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	IGKV1D-39	P04432	117 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	REG1A	P05451	166 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	S100G	P29377	79 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	ERVK-16	P61578	105 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	SSBP1	Q04837	148 aa	Known RBP	13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	REC114	Q7Z4M0	266 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	USMG5	Q96IX5	58 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	RABL2B	Q9UNT1	228 aa		13.4	□□□□□ -0.26
CTSB-223	ENST00000532370	NPIPB5	A8MRT5	1133 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370		K7EIL1	84 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	OVOL1	O14753	267 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	GSTZ1	O43708	216 aa	Predicted RBP	13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	OR2J3	O76001	311 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	PSMB6	P28072	239 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	PIGP	P57054	158 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	C9orf66	Q5T8R8	295 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	ZNF343	Q6P1L6	599 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	OR4C16	Q8NGL9	310 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	OR13C8	Q8NGS7	320 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	MARCH1	Q8TCQ1	289 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	MRAP	Q8TCY5	172 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	ZNF257	Q9Y2Q1	563 aa		13.39	□□□□□ -0.27
CTSB-223	ENST00000532370	TEX50	A0A1B0GTY4	177 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	DBX1	A6NMT0	343 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	CRYGC	P07315	174 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	RND3	P61587	244 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	ATP5G2	Q06055	141 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	SLC25A42	Q86VD7	318 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	OR10W1	Q8NGF6	305 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	FANCD2OS	Q96PS1	177 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	COMMD5	Q9GZQ3	224 aa		13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	RANGRF	Q9HD47	186 aa	Predicted RBP	13.38	□□□□□ -0.27
CTSB-223	ENST00000532370	IGLC7	A0M8Q6	106 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	ANKRD20A5P	A0PJZ0	165 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	FAM223B	A6NKX1	122 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	AKAIN1	P0CW23	69 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	CTRB1	P17538	263 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	MEF2D	Q14814	521 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	C15orf32	Q32M92	178 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	CNPY1	Q3B7I2	92 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	CTRB2	Q6GPI1	263 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	FAM223A	Q8IWN6	122 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	NECAP1	Q8NC96	275 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	OR6Q1	Q8NGQ2	317 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	ZNF486	Q96H40	463 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	SEC22A	Q96IW7	307 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	TP53RK	Q96S44	253 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	QTRT1	Q9BXR0	403 aa	Known RBP	13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	PEF1	Q9UBV8	284 aa	Known RBP	13.37	□□□□□ -0.27
CTSB-223	ENST00000532370		V9GYH0	126 aa		13.37	□□□□□ -0.27
CTSB-223	ENST00000532370	DNAH9	Q9NYC9	4486 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	NDUFB8	O95169	186 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	SERPINE2	P07093	398 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	PTBP1	P26599	531 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	S100A5	P33763	92 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	EXOSC2	Q13868	293 aa	Known RBP	13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	SP6	Q3SY56	376 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	PYDC2	Q56P42	97 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	CCDC190	Q86UF4	302 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	OR51S1	Q8NGJ8	323 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	ZFAND1	Q8TCF1	268 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	THAP7	Q9BT49	309 aa	Predicted RBP	13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	FBXL7	Q9UJT9	491 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	OR51B2	Q9Y5P1	312 aa		13.36	□□□□□ -0.27

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