RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TCRBV4S1A1TA0A5B7 111 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 IGKV1-5P01602 117 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 IGHG4P01861 327 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 TCRBP04435 133 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 FGF2P09038 288 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 OR9G9P0C7N8 305 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 PPIFP30405 207 aaKnown RBP17.47■□□□□ 0.39
LRRK1-208ENST00000532029 DEFA1P59665 94 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 DEFA3P59666 94 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 FOXE3Q13461 319 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 TMEM268Q5VZI3 342 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 SELENOHQ8IZQ5 122 aaKnown RBP17.47■□□□□ 0.39
LRRK1-208ENST00000532029 MINDY2Q8NBR6 621 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 OR4A16Q8NH70 328 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 TMEM56Q96MV1 263 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 FYTTD1Q96QD9 318 aaKnown RBP17.47■□□□□ 0.39
LRRK1-208ENST00000532029 C20orf85Q9H1P6 137 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 PRNDQ9UKY0 176 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 NSG2Q9Y328 171 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 TMEM56-RWDD3S4R434 201 aa17.47■□□□□ 0.39
LRRK1-208ENST00000532029 OPN1MWP04001 364 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 ELANEP08246 267 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 OPN1MW2P0DN77 364 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 OPN1MW3P0DN78 364 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 PPP1R1AQ13522 171 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 C19orf54Q5BKX5 351 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 CXorf66Q5JRM2 361 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-208ENST00000532029 KHDC1LQ5JSQ8 128 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 LGI3Q8N145 548 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 LHFPL5Q8TAF8 219 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 ENKURQ8TC29 256 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 IL22RA2Q969J5 263 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 CITED2Q99967 270 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-208ENST00000532029 FKBP11Q9NYL4 201 aa17.46■□□□□ 0.39
LRRK1-208ENST00000532029 PIGBOS1A0A0B4J2F0 54 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 RBMXL2O75526 392 aaKnown RBP17.45■□□□□ 0.38
LRRK1-208ENST00000532029 SFT2D2O95562 160 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 APELAP0DMC3 54 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 PF4V1P10720 104 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 MYOD1P15172 320 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 OR2B8PP59922 312 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 CD83Q01151 205 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 TCTEX1D4Q5JR98 221 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 HIST2H2BDQ6DRA6 164 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 TMEM65Q6PI78 240 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 OR5M8Q8NGP6 311 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 PRR13Q9NZ81 148 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 OR51B2Q9Y5P1 312 aa17.45■□□□□ 0.38
LRRK1-208ENST00000532029 TENM1Q9UKZ4 2725 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 C15orf61A6NNL5 157 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 ANXA7P20073 488 aaKnown RBP17.44■□□□□ 0.38
LRRK1-208ENST00000532029 RAB25P57735 213 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 NDUFA11Q86Y39 141 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 FAM219AQ8IW50 185 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 OR5T1Q8NG75 326 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 OR1L8Q8NGR8 309 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 CASTOR1Q8WTX7 329 aa17.44■□□□□ 0.38
LRRK1-208ENST00000532029 TSSC4Q9Y5U2 329 aaPredicted RBP17.44■□□□□ 0.38
LRRK1-208ENST00000532029 TRAV6A0A075B6T7 132 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 IGLV1-40P01703 118 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 IZUMO4Q1ZYL8 232 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 NSUN5P1Q3KNT7 163 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 C4orf46Q504U0 113 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 ASPHD1Q5U4P2 390 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 SLC35G3Q8N808 338 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 HINT2Q9BX68 163 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 QTRT1Q9BXR0 403 aaKnown RBP17.43■□□□□ 0.38
LRRK1-208ENST00000532029 ZNF355PQ9NSJ1 428 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 NUDT15Q9NV35 164 aa17.43■□□□□ 0.38
LRRK1-208ENST00000532029 PLXNB1O43157 2135 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 TEX50A0A1B0GTY4 177 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 HMX3A6NHT5 357 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 TEX22C9J3V5 150 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 E7EUB6 86 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 SOX15O60248 233 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 HLA-AP01891 365 aaKnown RBP17.42■□□□□ 0.38
LRRK1-208ENST00000532029 RPLP1P05386 114 aaKnown RBP17.42■□□□□ 0.38
LRRK1-208ENST00000532029 H2AFB2P0C5Z0 115 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 OR4E1P0C645 316 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 P0C879 139 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 TRAPPC2P0DI81 140 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 TRAPPC2BP0DI82 140 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 PSMB8P28062 276 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 THOC7Q6I9Y2 204 aaKnown RBP17.42■□□□□ 0.38
LRRK1-208ENST00000532029 LCNL1Q6ZST4 164 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 RNF152Q8N8N0 203 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 OR5B3Q8NH48 314 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 FAM110DQ8TAY7 271 aaPredicted RBP17.42■□□□□ 0.38
LRRK1-208ENST00000532029 LSM10Q969L4 123 aaKnown RBP17.42■□□□□ 0.38
LRRK1-208ENST00000532029 ZFP57Q9NU63 452 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 TMEM14BQ9NUH8 114 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 COA4Q9NYJ1 87 aa17.42■□□□□ 0.38
LRRK1-208ENST00000532029 A0A0B4J2A0 478 aa17.41■□□□□ 0.38
LRRK1-208ENST00000532029 A0A0G2JRQ6 117 aa17.41■□□□□ 0.38
LRRK1-208ENST00000532029 A0A1W2PRX2 142 aa17.41■□□□□ 0.38
LRRK1-208ENST00000532029 C9orf170A2RU37 121 aa17.41■□□□□ 0.38
LRRK1-208ENST00000532029 M0QZ24 198 aa17.41■□□□□ 0.38
LRRK1-208ENST00000532029 LYG2Q86SG7 212 aa17.41■□□□□ 0.38
LRRK1-208ENST00000532029 ALX4Q9H161 411 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-208ENST00000532029 SHPKQ9UHJ6 478 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms