RNA–Protein interactions for RNA: ENST00000530932.1

PPFIA1-218, Transcript of PTPRF interacting protein alpha 1, human

TSL 5

Gene PPFIA1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-218	ENST00000530932	MARCH11	A6NNE9	402 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	NPIPB5	A8MRT5	1133 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	CD74	P04233	296 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	RPA2	P15927	270 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	LPAR6	P43657	344 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	TAS2R19	P59542	299 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	RHOG	P84095	191 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	SSBP1	Q04837	148 aa	Known RBP	13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	ZNF585B	Q52M93	769 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	ZNF343	Q6P1L6	599 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	LHFPL1	Q86WI0	220 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	FAM223A	Q8IWN6	122 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	RANGRF	Q9HD47	186 aa	Predicted RBP	13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	AKIP1	Q9NQ31	210 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	SLC2A9	Q9NRM0	540 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	ZMAT5	Q9UDW3	170 aa	Known RBP	13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	RABL2B	Q9UNT1	228 aa		13.79	□□□□□ -0.2
PPFIA1-218	ENST00000530932	ANKRD34B	A5PLL1	514 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	DPPA5	A6NC42	116 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	CGB1	A6NKQ9	187 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	FGF2	P09038	288 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	AREG	P15514	252 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	ZP3	P21754	424 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	EXOSC2	Q13868	293 aa	Known RBP	13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	IL18	Q14116	193 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	C19orf35	Q6ZS72	473 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	TBC1D26	Q86UD7	250 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	OR4D10	Q8NGI6	311 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	MCFD2	Q8NI22	146 aa		13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.78	□□□□□ -0.2
PPFIA1-218	ENST00000530932	CCDC160	A6NGH7	325 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	CTDSPL	O15194	276 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	RAB3D	O95716	219 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PGAM2	P15259	253 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	INSL3	P51460	131 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PPP5C	P53041	499 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	OR2B8P	P59922	312 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	STEAP1B	Q6NZ63	245 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	COMMD5	Q9GZQ3	224 aa		13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	NXF2	Q9GZY0	626 aa	Known RBP	13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	RBM38	Q9H0Z9	239 aa	Known RBP	13.77	□□□□□ -0.21
PPFIA1-218	ENST00000530932	OR2J3	O76001	311 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	KRAS	P01116	189 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	TRBV12-3	P01733	135 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	CRYGC	P07315	174 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PSMB6	P28072	239 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	G6PC	P35575	357 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	RND3	P61587	244 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	ACSM6	Q6P461	480 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	CADM3	Q8N126	398 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	NECAP1	Q8NC96	275 aa		13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	ZNF486	Q96H40	463 aa	Predicted RBP	13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PEF1	Q9UBV8	284 aa	Known RBP	13.76	□□□□□ -0.21
PPFIA1-218	ENST00000530932	IGLC7	A0M8Q6	106 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	SAP30	O75446	220 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	CTRB1	P17538	263 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PI3	P19957	117 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	ECI1	P42126	302 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	ATP5G2	Q06055	141 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	SCGB2B2	Q4G0G5	96 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	CTRB2	Q6GPI1	263 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	THOC7	Q6I9Y2	204 aa	Known RBP	13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	ZNF429	Q86V71	674 aa		13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	SRSF8	Q9BRL6	282 aa	Known RBP	13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	QTRT1	Q9BXR0	403 aa	Known RBP	13.75	□□□□□ -0.21
PPFIA1-218	ENST00000530932	DHFR	P00374	187 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	REG1A	P05451	166 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PTBP1	P26599	531 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	TNFSF8	P32971	234 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	MEF2D	Q14814	521 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	C15orf32	Q32M92	178 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	FAAP20	Q6NZ36	180 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	TERB2	Q8NHR7	220 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	FANCD2OS	Q96PS1	177 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	RSL24D1	Q9UHA3	163 aa	Known RBP	13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	FBXL7	Q9UJT9	491 aa		13.74	□□□□□ -0.21
PPFIA1-218	ENST00000530932	GSTZ1	O43708	216 aa	Predicted RBP	13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	SNAPC5	O75971	98 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	IGKV1-39	P01597	117 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	IGKV1D-39	P04432	117 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PIGP	P57054	158 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	KLK9	Q2XQG4	91 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	OR4C16	Q8NGL9	310 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	OR1L8	Q8NGR8	309 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	OR13C8	Q8NGS7	320 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	PRR25	Q96S07	402 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	SOST	Q9BQB4	213 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	KLK9	Q9UKQ9	250 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	NSG2	Q9Y328	171 aa		13.73	□□□□□ -0.21
PPFIA1-218	ENST00000530932	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	TEX50	A0A1B0GTY4	177 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932		H0Y980	276 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	BMPR1B	O00238	502 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	NDUFB8	O95169	186 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	AKAIN1	P0CW23	69 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	TRAPPC2	P0DI81	140 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	TRAPPC2B	P0DI82	140 aa		13.72	□□□□□ -0.21
PPFIA1-218	ENST00000530932	HIST1H1B	P16401	226 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms