RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 CT45A3Q8NHU0 189 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
BDNF-215ENST00000530861 TRBV23-1A0A0A0MS06 115 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A10PA6NDY2 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A7PA6NKC0 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A22PA8MWA6 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A23PA8MXZ1 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 MT-CO2P00403 227 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 IGFBP2P18065 325 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 C21orf62-AS1Q17RA5 79 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 KIAA1644Q3SXP7 199 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 NRN1LQ496H8 165 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 SLC35E4Q6ICL7 350 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 ZNF525Q8N782 197 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 SMIM8Q96KF7 97 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 MS4A5Q9H3V2 200 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 HES4Q9HCC6 221 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 PHOX2AO14813 284 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 NTF3P20783 257 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 BSXQ3C1V8 233 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 OR4A47Q6IF82 309 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 PIP4P1Q86T03 277 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 PFDN5Q99471 154 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 DERL1Q9BUN8 251 aa10.44□□□□□ -0.74
BDNF-215ENST00000530861 TRAV34A0A0B4J273 112 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 SH2D7A6NKC9 451 aaPredicted RBP10.43□□□□□ -0.74
BDNF-215ENST00000530861 ARL14EPLP0DKL9 152 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 CAMPP49913 170 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 LYZP61626 148 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 ZNF146Q15072 292 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 TBR1Q16650 682 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 KRTCAP3Q53RY4 240 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 SLC35E3Q7Z769 313 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 MRGPRGQ86SM5 289 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 PNKDQ8N490 385 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 RPP25LQ8N5L8 163 aaKnown RBP10.43□□□□□ -0.74
BDNF-215ENST00000530861 LINC00527Q9UJ94 153 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 HPRT1P00492 218 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 BCL2P10415 239 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 KLF17Q5JT82 389 aaPredicted RBP10.43□□□□□ -0.74
BDNF-215ENST00000530861 Q6ZS92 163 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 NPIPB3Q92617 1050 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
BDNF-215ENST00000530861 TMEM106BQ9NUM4 274 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 C17orf100A8MU93 164 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 COX7A2P2O60397 106 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 CTRB1P17538 263 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 PAX9P55771 341 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 SPATA31B1PQ5VZV4 182 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 CTRB2Q6GPI1 263 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 ASCL4Q6XD76 172 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 HIST1H2BAQ96A08 127 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 FUT9Q9Y231 359 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 RNF115Q9Y4L5 304 aa10.43□□□□□ -0.74
BDNF-215ENST00000530861 FLI1Q01543 452 aaPredicted RBP10.42□□□□□ -0.74
BDNF-215ENST00000530861 MRPL54Q6P161 138 aaKnown RBP10.42□□□□□ -0.74
BDNF-215ENST00000530861 C11orf53Q8IXP5 236 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 FBXL15Q9H469 300 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 BARX1Q9HBU1 254 aaPredicted RBP10.42□□□□□ -0.74
BDNF-215ENST00000530861 IGHV1-69-2A0A0G2JMI3 117 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 FGF16O43320 207 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 IGHG3P01860 377 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 DUTP33316 252 aaKnown RBP10.42□□□□□ -0.74
BDNF-215ENST00000530861 GALR1P47211 349 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 OR9G1Q8NH87 305 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 GINS3Q9BRX5 216 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 SAMD10Q9BYL1 202 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 GPR61Q9BZJ8 451 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 GAL3ST2Q9H3Q3 398 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 KIAA1456Q9P272 454 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 CHD3Q12873 2000 aaKnown RBP10.42□□□□□ -0.74
BDNF-215ENST00000530861 TMSB15BA0A087X1C1 80 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 MUC21A0A0G2JKD1 596 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 MUC21A0A140T8X8 626 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 F6UZH7 168 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 SLC17A3O00476 420 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 WNT2P09544 360 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 MPZP25189 248 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 CFPP27918 469 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 OR5I1Q13606 314 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 MUC21Q5SSG8 566 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 ELOVL1Q9BW60 279 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 SSBP3Q9BWW4 388 aaPredicted RBP10.42□□□□□ -0.74
BDNF-215ENST00000530861 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
BDNF-215ENST00000530861 SRRM5B3KS81 715 aa10.41□□□□□ -0.74
BDNF-215ENST00000530861 RND2P52198 227 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms