RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 TRBV9A0A0B4J1U6 114 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 HMX3A6NHT5 357 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 NPIPB5A8MRT5 1133 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 CTDSPLO15194 276 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 CD74P04233 296 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 RHOGP84095 191 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 IL18Q14116 193 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 ZNF429Q86V71 674 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 CADM3Q8N126 398 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 SMIM4Q8WVI0 70 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 ZNF486Q96H40 463 aaPredicted RBP13.15□□□□□ -0.3
CCS-205ENST00000530384 COMMD5Q9GZQ3 224 aa13.15□□□□□ -0.3
CCS-205ENST00000530384 ANKRD34BA5PLL1 514 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 E7EUB6 86 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 K7EIL1 84 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 RAB3DO95716 219 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 DHFRP00374 187 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 DEFA5Q01523 94 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 ZNF45Q02386 682 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 ATP5G2Q06055 141 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 ZNF585BQ52M93 769 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 FAM209BQ5JX69 171 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 NECAP1Q8NC96 275 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 AKIP1Q9NQ31 210 aa13.14□□□□□ -0.31
CCS-205ENST00000530384 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
CCS-205ENST00000530384 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 A0A1B0GW64 132 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 PRH1P02810 166 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 CRYGCP07315 174 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 PGAM2P15259 253 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 PSMB6P28072 239 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 OR2B8PP59922 312 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CCS-205ENST00000530384 MEF2DQ14814 521 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 THOC7Q6I9Y2 204 aaKnown RBP13.13□□□□□ -0.31
CCS-205ENST00000530384 STEAP1BQ6NZ63 245 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
CCS-205ENST00000530384 SRSF8Q9BRL6 282 aaKnown RBP13.13□□□□□ -0.31
CCS-205ENST00000530384 NXF2Q9GZY0 626 aaKnown RBP13.13□□□□□ -0.31
CCS-205ENST00000530384 RSL24D1Q9UHA3 163 aaKnown RBP13.13□□□□□ -0.31
CCS-205ENST00000530384 SAP30O75446 220 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 RBMXL2O75526 392 aaKnown RBP13.12□□□□□ -0.31
CCS-205ENST00000530384 KRASP01116 189 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 MYOD1P15172 320 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 AREGP15514 252 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 RPA2P15927 270 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 G6PCP35575 357 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 ECI1P42126 302 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 RND3P61587 244 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
CCS-205ENST00000530384 OR4D10Q8NGI6 311 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 TERB2Q8NHR7 220 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
CCS-205ENST00000530384 SORL1Q92673 2214 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 SNAPC5O75971 98 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 OR2J3O76001 311 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 HIST1H1BP16401 226 aaKnown RBP13.11□□□□□ -0.31
CCS-205ENST00000530384 CTRB1P17538 263 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 PTBP1P26599 531 aaKnown RBP eCLIP13.11□□□□□ -0.317e-6■■□□□ 11.4
CCS-205ENST00000530384 KLK9Q2XQG4 91 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 SCGB2B2Q4G0G5 96 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 CTRB2Q6GPI1 263 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 HSD17B13Q7Z5P4 300 aaPredicted RBP13.11□□□□□ -0.31
CCS-205ENST00000530384 ZFAND1Q8TCF1 268 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 QTRT1Q9BXR0 403 aaKnown RBP13.11□□□□□ -0.31
CCS-205ENST00000530384 KLK9Q9UKQ9 250 aa13.11□□□□□ -0.31
CCS-205ENST00000530384 DISC1C4P0D8 188 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
CCS-205ENST00000530384 GSTZ1O43708 216 aaPredicted RBP13.1□□□□□ -0.31
CCS-205ENST00000530384 SERPINE2P07093 398 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 DEFA4P12838 97 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 TNFSF8P32971 234 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 PPP5CP53041 499 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 PIGPP57054 158 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 KLF5Q13887 457 aaPredicted RBP13.1□□□□□ -0.31
CCS-205ENST00000530384 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 DEFB121Q5J5C9 76 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 OR1L8Q8NGR8 309 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 FBXL7Q9UJT9 491 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 PRNDQ9UKY0 176 aa13.1□□□□□ -0.31
CCS-205ENST00000530384 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
CCS-205ENST00000530384 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.09□□□□□ -0.31
CCS-205ENST00000530384 IGLC7A0M8Q6 106 aa13.09□□□□□ -0.31
CCS-205ENST00000530384 FABP12A6NFH5 140 aa13.09□□□□□ -0.31
CCS-205ENST00000530384 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
CCS-205ENST00000530384 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
CCS-205ENST00000530384 TRAPPC2P0DI81 140 aa13.09□□□□□ -0.31
CCS-205ENST00000530384 TRAPPC2BP0DI82 140 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms