RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 LINC01590Q5TEZ4 76 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 C19orf48Q6RUI8 117 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 DCTN5Q9BTE1 182 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 F12P00748 615 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 TNFSF10P50591 281 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 IFITM3Q01628 133 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF660Q6AZW8 331 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 POC1AQ8NBT0 407 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 C1orf162Q8NEQ5 155 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 OR5A1Q8NGJ0 315 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF418Q8TF45 676 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 GDF15Q99988 308 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 SH3BGRL3Q9H299 93 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 TM4SF5O14894 197 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 SSTR5P35346 364 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 FXYD3Q14802 87 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 TIMM23BQ5SRD1 257 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 DDB2Q92466 427 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 SPSB4Q96A44 273 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 SIGLEC12Q96PQ1 595 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 PHLDA3Q9Y5J5 127 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 UNC119Q13432 240 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM177Q53S58 311 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 SSBP3Q9BWW4 388 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 RBMY1BA6NDE4 496 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 RBMY1EA6NEQ0 496 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 RBMY1DP0C7P1 496 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 RBMY1A1P0DJD3 496 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 RBMY1CP0DJD4 496 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF324BQ6AW86 544 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 TM2D1Q9BX74 207 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 MRPS18CQ9Y3D5 142 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 CA1P00915 261 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 TRGC2P03986 189 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 KLK2P20151 261 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 NRN1LQ496H8 165 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 CYP2G1PQ6ZSU1 146 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 FDCSPQ8NFU4 85 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 LINC01560Q8TB33 94 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 PARLQ9H300 379 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 YAE1D1Q9NRH1 226 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 IGLV3-19P01714 112 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 DLX6P56179 175 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 VKORC1L1Q8N0U8 176 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 DRAM1Q8N682 238 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 DPH3Q96FX2 82 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 SIPA1L1O43166 1804 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 POU2AF1Q16633 256 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 FAM57AQ8TBR7 257 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 NEU4Q8WWR8 484 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 GPR82Q96P67 336 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 TCF19Q9Y242 345 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 CYSLTR1Q9Y271 337 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 BRCA1P38398 1863 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 C7orf71A4D174 169 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 GPX1P07203 203 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 DANCRP0C864 163 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF708P17019 499 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 SNRPD3P62318 126 aaKnown RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 HIST1H1AQ02539 215 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-221ENST00000529873 FAM71F2Q6NXP2 309 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 AICDAQ9GZX7 198 aa7.22□□□□□ -1.25
CTNND1-221ENST00000529873 A0A0G2JMZ2 1700 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 LRRC37A2A6NM11 1700 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 TRGC1P0CF51 173 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 NPPCP23582 126 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM249Q2WGJ8 235 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 DNM1P46Q6ZS02 220 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 OR51G1Q8NGK1 321 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 ATP6V0BQ99437 205 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 KIR2DL4Q99706 377 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM106BQ9NUM4 274 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 SPCS1Q9Y6A9 102 aa7.21□□□□□ -1.25
CTNND1-221ENST00000529873 NPFFO15130 113 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 ZFAND6Q6FIF0 208 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 CENPVQ7Z7K6 275 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-221ENST00000529873 IGKV3D-11A0A0A0MRZ8 115 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 TRAV8-2A0A0B4J237 113 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 SNRPCP09234 159 aaKnown RBP7.21□□□□□ -1.26
CTNND1-221ENST00000529873 RFPL3SP0C7P2 107 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 FAM181BA6NEQ2 426 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 TMEM250H0YL14 139 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 RPL39P5Q59GN2 51 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 GLRX5Q86SX6 157 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 FAM90A1Q86YD7 464 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 PRDM6Q9NQX0 595 aa7.21□□□□□ -1.26
CTNND1-221ENST00000529873 IGKV3D-15A0A087WSY6 115 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 UBE2CO00762 179 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 KLF4O43474 513 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 IGKV3-15P01624 115 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 GPX4P36969 197 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-221ENST00000529873 LINC00305Q7Z4B0 112 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 RND3P61587 244 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 APCDD1LQ8NCL9 501 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 OR2K2Q8NGT1 345 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 NABP2Q9BQ15 211 aa7.2□□□□□ -1.26
CTNND1-221ENST00000529873 SSBP4Q9BWG4 385 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms