RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ZNF79Q15937 498 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 THAP7Q9BT49 309 aaPredicted RBP12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 HRASLSQ9HDD0 168 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 ZNF355PQ9NSJ1 428 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 TRBV9A0A0B4J1U6 114 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 KRASP01116 189 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 IGHV3-11P01762 117 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 PGAM2P15259 253 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 S100GP29377 79 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 G6PCP35575 357 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 ETV6P41212 452 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 PPP5CP53041 499 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 PIGPP57054 158 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 OR2B8PP59922 312 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 ZNF616Q08AN1 781 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 DMBX1Q8NFW5 382 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 OR6Q1Q8NGQ2 317 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 OR13C8Q8NGS7 320 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 MARCH1Q8TCQ1 289 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 TRIM63Q969Q1 353 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 COA4Q9NYJ1 87 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 NDUFA13Q9P0J0 144 aa12.45□□□□□ -0.42
TSPAN4-218ENST00000529566 DUS4LO95620 317 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 PRH1P02810 166 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 CRYGCP07315 174 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 AREGP15514 252 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 S100A5P33763 92 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 DEFA5Q01523 94 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 KLK9Q2XQG4 91 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 SEC22AQ96IW7 307 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 FYTTD1Q96QD9 318 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 RTBDNQ9BSG5 229 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 SLC2A8Q9NY64 477 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 KLK9Q9UKQ9 250 aa12.44□□□□□ -0.42
TSPAN4-218ENST00000529566 IGHV4OR15-8A0A075B7B6 117 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 A0A087WW49 117 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 A0A0G2JLM5 398 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 NPIPB5A8MRT5 1133 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 DISC1C4P0D8 188 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 WIPF1O43516 503 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 CTSDP07339 412 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 OR8U8P0C7N1 319 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 RAB25P57735 213 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 KLF9Q13886 244 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 PYDC2Q56P42 97 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 Q8N402 240 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 OR51S1Q8NGJ8 323 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 USMG5Q96IX5 58 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 TP53RKQ96S44 253 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 MCRIP2Q9BUT9 160 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 ZNF257Q9Y2Q1 563 aa12.43□□□□□ -0.42
TSPAN4-218ENST00000529566 TEX50A0A1B0GTY4 177 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 LINC01619G3V211 115 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 H0Y980 276 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 PRB2P02812 416 aaPredicted RBP12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 HSPB1P04792 205 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 PSMB6P28072 239 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 ECI1P42126 302 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 KRTAP10-11P60412 298 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 ERVK-16P61578 105 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 EGFEM1PQ0D2K5 195 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 SURF2Q15527 256 aaPredicted RBP12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 PRRT1Q99946 306 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 AKIP1Q9NQ31 210 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
TSPAN4-218ENST00000529566 C3orf85A0A1B0GTC6 90 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 DBX1A6NMT0 343 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 P0C879 139 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 CTRB1P17538 263 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 SLURP1P55000 103 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 RHOGP84095 191 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 CTRB2Q6GPI1 263 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 DPF1Q92782 380 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 DLX4Q92988 240 aaPredicted RBP12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 QTRT1Q9BXR0 403 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 COMMD5Q9GZQ3 224 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 NDUFA4L2Q9NRX3 87 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 TMEM14BQ9NUH8 114 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 COPZ2Q9P299 210 aa12.41□□□□□ -0.42
TSPAN4-218ENST00000529566 FAM223BA6NKX1 122 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 IGKV1-5P01602 117 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 REG1AP05451 166 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 SERPINE2P07093 398 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 SP6Q3SY56 376 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 FAM223AQ8IWN6 122 aa12.4□□□□□ -0.42
TSPAN4-218ENST00000529566 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms