RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 A0A087WW49 117 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 C13orf42A0A1B0GVH6 325 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 CGB1A6NKQ9 187 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 LINC01619G3V211 115 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 MYOD1P15172 320 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 DMBX1Q8NFW5 382 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 ZNF486Q96H40 463 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-211ENST00000528563 USMG5Q96IX5 58 aa12.98□□□□□ -0.33
HIF3A-211ENST00000528563 MARCH11A6NNE9 402 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 KRASP01116 189 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 RPA2P15927 270 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 HOXD3P31249 432 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-211ENST00000528563 OR2B8PP59922 312 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 RND3P61587 244 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 ZNF45Q02386 682 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 MEF2DQ14814 521 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 SLC25A42Q86VD7 318 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 DCUN1D4Q92564 292 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-211ENST00000528563 MRGPRFQ96AM1 343 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 FYTTD1Q96QD9 318 aaKnown RBP12.97□□□□□ -0.33
HIF3A-211ENST00000528563 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 PRH1P02810 166 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 CRYGCP07315 174 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 PGAM2P15259 253 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 AREGP15514 252 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 PI3P19957 117 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 PTBP1P26599 531 aaKnown RBP eCLIP12.97□□□□□ -0.33
HIF3A-211ENST00000528563 ERVK-16P61578 105 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 KLK9Q2XQG4 91 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 ZNF343Q6P1L6 599 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 AKIP1Q9NQ31 210 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 AURKAIP1Q9NWT8 199 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-211ENST00000528563 KLK9Q9UKQ9 250 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 ZNF257Q9Y2Q1 563 aa12.97□□□□□ -0.33
HIF3A-211ENST00000528563 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 AKAIN1P0CW23 69 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 G6PCP35575 357 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 SLURP1P55000 103 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 PIGPP57054 158 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 RHOGP84095 191 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 DEFA5Q01523 94 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 FAAP20Q6NZ36 180 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 NECAP1Q8NC96 275 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 ZFAND1Q8TCF1 268 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.34
HIF3A-211ENST00000528563 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.34
HIF3A-211ENST00000528563 TEX50A0A1B0GTY4 177 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 FAM223BA6NKX1 122 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 SEC14L6B5MCN3 397 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 IGKV1-39P01597 117 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 IGKV1D-39P04432 117 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 PSMB6P28072 239 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 C9orf66Q5T8R8 295 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 FAM223AQ8IWN6 122 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 OR4C16Q8NGL9 310 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 OR13C8Q8NGS7 320 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
HIF3A-211ENST00000528563 THAP7Q9BT49 309 aaPredicted RBP12.95□□□□□ -0.34
HIF3A-211ENST00000528563 IGLC7A0M8Q6 106 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 ANKRD34BA5PLL1 514 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 DPPA5A6NC42 116 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 DISC1C4P0D8 188 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 OVOL1O14753 267 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 CTRB1P17538 263 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 PPP5CP53041 499 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 CCDC190Q86UF4 302 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 SRSF8Q9BRL6 282 aaKnown RBP12.94□□□□□ -0.34
HIF3A-211ENST00000528563 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
HIF3A-211ENST00000528563 V9GYH0 126 aa12.94□□□□□ -0.34
HIF3A-211ENST00000528563 CTSDP07339 412 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-211ENST00000528563 S100A5P33763 92 aa12.93□□□□□ -0.34
HIF3A-211ENST00000528563 C19orf35Q6ZS72 473 aa12.93□□□□□ -0.34
HIF3A-211ENST00000528563 OR1L8Q8NGR8 309 aa12.93□□□□□ -0.34
HIF3A-211ENST00000528563 TP53RKQ96S44 253 aa12.93□□□□□ -0.34
HIF3A-211ENST00000528563 RTBDNQ9BSG5 229 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-211ENST00000528563 QTRT1Q9BXR0 403 aaKnown RBP12.93□□□□□ -0.34
HIF3A-211ENST00000528563 NSG2Q9Y328 171 aa12.93□□□□□ -0.34
HIF3A-211ENST00000528563 H0Y980 276 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 SNAPC5O75971 98 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 OR2J3O76001 311 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 TRBV12-3P01733 135 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 SERPINE2P07093 398 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 TRAPPC2P0DI81 140 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 TRAPPC2BP0DI82 140 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 ZP3P21754 424 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 INSL3P51460 131 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-211ENST00000528563 SURF2Q15527 256 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-211ENST00000528563 OR10W1Q8NGF6 305 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 OR51S1Q8NGJ8 323 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 NDUFA4L2Q9NRX3 87 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 COPZ2Q9P299 210 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 ZMAT5Q9UDW3 170 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms