RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 FHL3Q13643 280 aa10.37□□□□□ -0.75
CAPN1-209ENST00000527469 PYDC2Q56P42 97 aa10.37□□□□□ -0.75
CAPN1-209ENST00000527469 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
CAPN1-209ENST00000527469 CCDC71LQ8N9Z2 235 aa10.37□□□□□ -0.75
CAPN1-209ENST00000527469 ADAD2Q8NCV1 583 aaKnown RBP10.37□□□□□ -0.75
CAPN1-209ENST00000527469 OR4D10Q8NGI6 311 aa10.37□□□□□ -0.75
CAPN1-209ENST00000527469 NXF2Q9GZY0 626 aaKnown RBP10.37□□□□□ -0.75
CAPN1-209ENST00000527469 RANGRFQ9HD47 186 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-209ENST00000527469 C14orf166Q9Y224 244 aaKnown RBP10.37□□□□□ -0.75
CAPN1-209ENST00000527469 ZNF257Q9Y2Q1 563 aa10.37□□□□□ -0.75
CAPN1-209ENST00000527469 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 A0A087WW49 117 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 ANKRD34BA5PLL1 514 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 HMX3A6NHT5 357 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 FAM223BA6NKX1 122 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 GSTZ1O43708 216 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-209ENST00000527469 BRI3O95415 125 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 HSPB1P04792 205 aaKnown RBP10.36□□□□□ -0.75
CAPN1-209ENST00000527469 IL6RP08887 468 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-209ENST00000527469 PI3P19957 117 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-209ENST00000527469 G6PCP35575 357 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 PIGPP57054 158 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 RHOGP84095 191 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 ATP5G2Q06055 141 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 POU2AF1Q16633 256 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 FAM223AQ8IWN6 122 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 TTC9CQ8N5M4 171 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 TSC22D3Q99576 134 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 PRRT1Q99946 306 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 HINT2Q9BX68 163 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 RBM38Q9H0Z9 239 aaKnown RBP10.36□□□□□ -0.75
CAPN1-209ENST00000527469 MCUBQ9NWR8 336 aa10.36□□□□□ -0.75
CAPN1-209ENST00000527469 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 TEX22C9J3V5 150 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 OVOL1O14753 267 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 CYB5BO43169 146 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 WIPF1O43516 503 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 RBMXL2O75526 392 aaKnown RBP10.35□□□□□ -0.75
CAPN1-209ENST00000527469 ATG12O94817 140 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 PRH1P02810 166 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 ZNF735P0CB33 412 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 ZP3P21754 424 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 FAUP35544 74 aaKnown RBP10.35□□□□□ -0.75
CAPN1-209ENST00000527469 SLURP1P55000 103 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 AP3S2P59780 193 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 DEFA5Q01523 94 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 SPANXN2Q5MJ10 180 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 FAAP20Q6NZ36 180 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 LHFPL1Q86WI0 220 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 NECAP1Q8NC96 275 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 OR13C8Q8NGS7 320 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 MARCH1Q8TCQ1 289 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 THAP7Q9BT49 309 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-209ENST00000527469 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
CAPN1-209ENST00000527469 FAM212BQ9NTI7 297 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-209ENST00000527469 FKBP11Q9NYL4 201 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 NDUFA13Q9P0J0 144 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 SCP2D1Q9UJQ7 156 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 TGP01266 2768 aa10.35□□□□□ -0.75
CAPN1-209ENST00000527469 TEX13DA0A0J9YY54 714 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-209ENST00000527469 NPIPB5A8MRT5 1133 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 H0Y980 276 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 REG1AP05451 166 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 FGF2P09038 288 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 TRAPPC2P0DI81 140 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 TRAPPC2BP0DI82 140 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 MYOD1P15172 320 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 PSMB6P28072 239 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 MECP2P51608 486 aaKnown RBP10.34□□□□□ -0.75
CAPN1-209ENST00000527469 OR2B8PP59922 312 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 RND3P61587 244 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 EXOSC2Q13868 293 aaKnown RBP10.34□□□□□ -0.75
CAPN1-209ENST00000527469 TRIM16LQ309B1 348 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 ZNF585BQ52M93 769 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
CAPN1-209ENST00000527469 Q8N402 240 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 OR4C16Q8NGL9 310 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 OR4A16Q8NH70 328 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 RNASE11Q8TAA1 199 aaKnown RBP10.34□□□□□ -0.75
CAPN1-209ENST00000527469 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 DCUN1D4Q92564 292 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 AKIP1Q9NQ31 210 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 PEF1Q9UBV8 284 aaKnown RBP10.34□□□□□ -0.75
CAPN1-209ENST00000527469 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 OR51B2Q9Y5P1 312 aa10.34□□□□□ -0.75
CAPN1-209ENST00000527469 C3orf85A0A1B0GTC6 90 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 ANKRD20A5PA0PJZ0 165 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 SAP30O75446 220 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 OR2J3O76001 311 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 CTSDP07339 412 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-209ENST00000527469 AREGP15514 252 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
CAPN1-209ENST00000527469 INPP1P49441 399 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 AKR1C2P52895 323 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 SURF2Q15527 256 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-209ENST00000527469 TATDN3Q17R31 274 aa10.33□□□□□ -0.76
CAPN1-209ENST00000527469 C15orf32Q32M92 178 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms