RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZNF429Q86V71 674 aa16.1■□□□□ 0.17
TRAPPC9-215ENST00000524162 NECAP1Q8NC96 275 aa16.1■□□□□ 0.17
TRAPPC9-215ENST00000524162 ALX4Q9H161 411 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC9-215ENST00000524162 RSL24D1Q9UHA3 163 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-215ENST00000524162 S1PR2O95136 353 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 DHFRP00374 187 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 IGHV3-11P01762 117 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 ERVK-16P61578 105 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 DGCR2P98153 550 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 MEF2DQ14814 521 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 C10orf55Q5SWW7 151 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 SSX9Q7RTT3 188 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 DMBX1Q8NFW5 382 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 TERB2Q8NHR7 220 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 DCUN1D4Q92564 292 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 SOSTQ9BQB4 213 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 HRASLSQ9HDD0 168 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 TMEM140Q9NV12 185 aa16.09■□□□□ 0.17
TRAPPC9-215ENST00000524162 A0A1B0GW64 132 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 M0QYG6 137 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 GSTZ1O43708 216 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 RPA2P15927 270 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 HOXD3P31249 432 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 ECI1P42126 302 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 OR2B8PP59922 312 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 STEAP1BQ6NZ63 245 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 MRAPQ8TCY5 172 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 DLX4Q92988 240 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 COMMD5Q9GZQ3 224 aa16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 C6orf62Q9GZU0 229 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 RBM38Q9H0Z9 239 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 PEF1Q9UBV8 284 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-215ENST00000524162 E7EUB6 86 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 PRB2P02812 416 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 CTRB1P17538 263 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 PSMB6P28072 239 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 LPAR6P43657 344 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 RHOGP84095 191 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 ZNF45Q02386 682 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 IL18Q14116 193 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 CTRB2Q6GPI1 263 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 ACSM6Q6P461 480 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 TBC1D26Q86UD7 250 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 MCFD2Q8NI22 146 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 FYTTD1Q96QD9 318 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 TSC22D3Q99576 134 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 AKIP1Q9NQ31 210 aa16.07■□□□□ 0.16
TRAPPC9-215ENST00000524162 DPPA5A6NC42 116 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 CGB1A6NKQ9 187 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 B3GALNT1O75752 331 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 RAB3DO95716 219 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 APELAP0DMC3 54 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 HIST1H1BP16401 226 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 TNFSF8P32971 234 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 SLURP1P55000 103 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 SURF2Q15527 256 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 PHLDA2Q53GA4 152 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 ZFAND1Q8TCF1 268 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 FKBP11Q9NYL4 201 aa16.06■□□□□ 0.16
TRAPPC9-215ENST00000524162 HMX3A6NHT5 357 aa16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 K7EIL1 84 aa16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 RBMXL2O75526 392 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 ATP5G2Q06055 141 aa16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 KLF5Q13887 457 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 RNASE12Q5GAN4 147 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 QTRT1Q9BXR0 403 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-215ENST00000524162 TRAV3A0A0B4J244 114 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 IGLC7A0M8Q6 106 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 KRASP01116 189 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 AKAIN1P0CW23 69 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 OR1L8Q8NGR8 309 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 OR5B3Q8NH48 314 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 FANCD2OSQ96PS1 177 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 PRNDQ9UKY0 176 aa16.04■□□□□ 0.16
TRAPPC9-215ENST00000524162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 WI2-2373I1.2A0A1W2PRP0 233 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 FABP12A6NFH5 140 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 H0Y980 276 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 SNAPC5O75971 98 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 PIGPP57054 158 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 C15orf32Q32M92 178 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 CCDC71LQ8N9Z2 235 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 SEC22AQ96IW7 307 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 ELOVL1Q9BW60 279 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 TMEM14BQ9NUH8 114 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 SLC2A8Q9NY64 477 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 SIGLEC8Q9NYZ4 499 aa16.03■□□□□ 0.16
TRAPPC9-215ENST00000524162 COL7A1Q02388 2944 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 IGLV11-55A0A075B6I3 123 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 ANKRD20A5PA0PJZ0 165 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 DISC1C4P0D8 188 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 CYB5BO43169 146 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 CTSDP07339 412 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 TRAPPC2P0DI81 140 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 TRAPPC2BP0DI82 140 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 PGAM2P15259 253 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 AREGP15514 252 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 TATDN3Q17R31 274 aa16.02■□□□□ 0.16
TRAPPC9-215ENST00000524162 DEDD2Q8WXF8 326 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms