RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ATRAIDQ6UW56 229 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 FAM90A1Q86YD7 464 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 PNKDQ8N490 385 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 FAM168AQ92567 244 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 LY6DQ14210 128 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 ACP7Q6ZNF0 438 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 SLC25A17O43808 307 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 UNQ6494/PRO21346Q6UXR6 183 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 CEACAM18A8MTB9 384 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 TM4SF5O14894 197 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 HSPE1P61604 102 aaKnown RBP13.71□□□□□ -0.21
USP42-207ENST00000521713 DGAT2L7PQ6IED9 249 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 SH3BGRL3Q9H299 93 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 VCX2Q9H322 139 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 AUP1Q9Y679 476 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 CHD5Q8TDI0 1954 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 IL18BPO95998 194 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 SRP19P09132 144 aaKnown RBP13.71□□□□□ -0.21
USP42-207ENST00000521713 TIMP3P35625 211 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 SAPCD1Q5SSQ6 148 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 FGFRL1Q8N441 504 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 IQCF6A8MYZ5 107 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 LINC00869P0C866 280 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 RNF224P0DH78 156 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 MAS1LP35410 378 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 CA7P43166 264 aa13.71□□□□□ -0.21
USP42-207ENST00000521713 DNLZQ5SXM8 178 aa13.71□□□□□ -0.22
USP42-207ENST00000521713 GPR146Q96CH1 333 aa13.71□□□□□ -0.22
USP42-207ENST00000521713 RPS20P60866 119 aaKnown RBP13.7□□□□□ -0.22
USP42-207ENST00000521713 ZNRF1Q8ND25 227 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 MSRB2Q9Y3D2 182 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 RNF222A6NCQ9 220 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 STPG3Q8N7X2 389 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 CLDN16Q9Y5I7 305 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 ATP5IP56385 69 aaPredicted RBP13.7□□□□□ -0.22
USP42-207ENST00000521713 SOSTQ9BQB4 213 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 MEF2CQ06413 473 aaPredicted RBP13.7□□□□□ -0.22
USP42-207ENST00000521713 CYB5R2Q6BCY4 276 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 BMPERQ8N8U9 685 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 OR52M1Q8NGK5 317 aa13.7□□□□□ -0.22
USP42-207ENST00000521713 CACNA1BQ00975 2339 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 A0A0G2JK05 382 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 ZNF837Q96EG3 531 aaPredicted RBP13.69□□□□□ -0.22
USP42-207ENST00000521713 SSBP3Q9BWW4 388 aaPredicted RBP13.69□□□□□ -0.22
USP42-207ENST00000521713 SPRR3Q9UBC9 169 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 NEUROG3Q9Y4Z2 214 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 S1PR2O95136 353 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 HOXA4Q00056 320 aaPredicted RBP13.69□□□□□ -0.22
USP42-207ENST00000521713 IGKV3D-15A0A087WSY6 115 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 IGHV3-21A0A0B4J1V1 117 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 LOC107984156A0A0G2JMH3 177 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 SMIM13P0DJ93 91 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 ARL17AQ8IVW1 177 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 TRAV30A0A087WSZ9 112 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.69□□□□□ -0.22
USP42-207ENST00000521713 TMEM189A5PLL7 270 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 MFAP4P55083 255 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
USP42-207ENST00000521713 WNT9BO14905 357 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 ZNF735P0CB33 412 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 RNFT1Q5M7Z0 435 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 RBPMS2Q6ZRY4 209 aaKnown RBP13.68□□□□□ -0.22
USP42-207ENST00000521713 LURAP1LQ8IV03 231 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 IL36RNQ9UBH0 155 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 FGF16O43320 207 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 TNFRSF9Q07011 255 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 JOSD1Q15040 202 aaPredicted RBP13.68□□□□□ -0.22
USP42-207ENST00000521713 FAM106AQ4KMX7 169 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 OR1N2Q8NGR9 330 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 METTL26Q96S19 204 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 HIST1H4GQ99525 98 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 MARCH11A6NNE9 402 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 LRRC75BQ2VPJ9 315 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 ALKBH7Q9BT30 221 aaPredicted RBP13.68□□□□□ -0.22
USP42-207ENST00000521713 WNT5AP41221 380 aa13.68□□□□□ -0.22
USP42-207ENST00000521713 A0A1B0GTI1 187 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 SMAGPQ0VAQ4 97 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 MRPL32Q9BYC8 188 aaKnown RBP13.67□□□□□ -0.22
USP42-207ENST00000521713 MAP1LC3AQ9H492 121 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 C8orf88P0DMB2 117 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 CKS2P33552 79 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 TM2D1Q9BX74 207 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 LY6EQ16553 131 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 SSTR5P35346 364 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 FHITP49789 147 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 AMMECR1LQ6DCA0 310 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 RTN4RL2Q86UN3 420 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 MESP1Q9BRJ9 268 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 RTN4RQ9BZR6 473 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 IL36BQ9NZH7 164 aa13.67□□□□□ -0.22
USP42-207ENST00000521713 F8VVB4 439 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 F8VWA3 439 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 UNC119Q13432 240 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 PRNTQ86SH4 94 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms