RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RABL2AQ9UBK7 228 aaPredicted RBP15.92■□□□□ 0.14
TRIM35-203ENST00000521253 RABL2BQ9UNT1 228 aa15.92■□□□□ 0.14
TRIM35-203ENST00000521253 MARCH11A6NNE9 402 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 CTDSPLO15194 276 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 TNFSF8P32971 234 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 ZNF45Q02386 682 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 C9orf66Q5T8R8 295 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 STEAP1BQ6NZ63 245 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 MRAPQ8TCY5 172 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 USMG5Q96IX5 58 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 SLC2A9Q9NRM0 540 aa15.91■□□□□ 0.14
TRIM35-203ENST00000521253 CGB1A6NKQ9 187 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 OVOL1O14753 267 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 RAB3DO95716 219 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 PGAM2P15259 253 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 AREGP15514 252 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 ERVK-16P61578 105 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 RHOGP84095 191 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 C19orf35Q6ZS72 473 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 SLC25A42Q86VD7 318 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 AKIP1Q9NQ31 210 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 RSL24D1Q9UHA3 163 aaKnown RBP15.9■□□□□ 0.14
TRIM35-203ENST00000521253 ZNF257Q9Y2Q1 563 aa15.9■□□□□ 0.14
TRIM35-203ENST00000521253 TRBV9A0A0B4J1U6 114 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 ANKRD34BA5PLL1 514 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 DPPA5A6NC42 116 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 NPIPB5A8MRT5 1133 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 KRASP01116 189 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 PI3P19957 117 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 G6PCP35575 357 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 PPP5CP53041 499 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 OR2B8PP59922 312 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 FAAP20Q6NZ36 180 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 ZNF343Q6P1L6 599 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 SOSTQ9BQB4 213 aa15.89■□□□□ 0.13
TRIM35-203ENST00000521253 RANGRFQ9HD47 186 aaPredicted RBP15.89■□□□□ 0.13
TRIM35-203ENST00000521253 FAM212BQ9NTI7 297 aaPredicted RBP15.89■□□□□ 0.13
TRIM35-203ENST00000521253 WI2-2373I1.2A0A1W2PRP0 233 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 FABP12A6NFH5 140 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 FAM223BA6NKX1 122 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 K7EIL1 84 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 CRYGCP07315 174 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 FGF2P09038 288 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 SCGB2B2Q4G0G5 96 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 FAM223AQ8IWN6 122 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 TERB2Q8NHR7 220 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 ZNF486Q96H40 463 aaPredicted RBP15.88■□□□□ 0.13
TRIM35-203ENST00000521253 COMMD5Q9GZQ3 224 aa15.88■□□□□ 0.13
TRIM35-203ENST00000521253 GSTZ1O43708 216 aaPredicted RBP15.87■□□□□ 0.13
TRIM35-203ENST00000521253 OR2J3O76001 311 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 TRBV12-3P01733 135 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 PSMB6P28072 239 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 PIGPP57054 158 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 RND3P61587 244 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 MEF2DQ14814 521 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 NECAP1Q8NC96 275 aa15.87■□□□□ 0.13
TRIM35-203ENST00000521253 PEF1Q9UBV8 284 aaKnown RBP15.87■□□□□ 0.13
TRIM35-203ENST00000521253 ZNF701M0R085 212 aaPredicted RBP15.86■□□□□ 0.13
TRIM35-203ENST00000521253 IGKV1-39P01597 117 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 IGKV1D-39P04432 117 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 REG1AP05451 166 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 CTRB1P17538 263 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 ZP3P21754 424 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 ATP5G2Q06055 141 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 CTRB2Q6GPI1 263 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 CADM3Q8N126 398 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 OR4C16Q8NGL9 310 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 MRGPRFQ96AM1 343 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 QTRT1Q9BXR0 403 aaKnown RBP15.86■□□□□ 0.13
TRIM35-203ENST00000521253 ZMAT5Q9UDW3 170 aaKnown RBP15.86■□□□□ 0.13
TRIM35-203ENST00000521253 NSG2Q9Y328 171 aa15.86■□□□□ 0.13
TRIM35-203ENST00000521253 IGLC7A0M8Q6 106 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 AKAIN1P0CW23 69 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 PTBP1P26599 531 aaKnown RBP eCLIP15.85■□□□□ 0.134e-7■■■□□ 16.2
TRIM35-203ENST00000521253 INSL3P51460 131 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 EXOSC2Q13868 293 aaKnown RBP15.85■□□□□ 0.13
TRIM35-203ENST00000521253 C15orf32Q32M92 178 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 OR13C8Q8NGS7 320 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 MARCH1Q8TCQ1 289 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 FANCD2OSQ96PS1 177 aa15.85■□□□□ 0.13
TRIM35-203ENST00000521253 TEX50A0A1B0GTY4 177 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 DISC1C4P0D8 188 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 SAP30O75446 220 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 DHFRP00374 187 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 SERPINE2P07093 398 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 ACSM6Q6P461 480 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 ZNF429Q86V71 674 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 ZFAND1Q8TCF1 268 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 SEC22AQ96IW7 307 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 SRSF8Q9BRL6 282 aaKnown RBP15.84■□□□□ 0.13
TRIM35-203ENST00000521253 FBXL7Q9UJT9 491 aa15.84■□□□□ 0.13
TRIM35-203ENST00000521253 ANKRD20A5PA0PJZ0 165 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 H0Y980 276 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 SNAPC5O75971 98 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 TRAPPC2P0DI81 140 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 TRAPPC2BP0DI82 140 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 ECI1P42126 302 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 KLF5Q13887 457 aaPredicted RBP15.83■□□□□ 0.12
TRIM35-203ENST00000521253 KLK9Q2XQG4 91 aa15.83■□□□□ 0.12
TRIM35-203ENST00000521253 OR10W1Q8NGF6 305 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms