RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 OR5B3Q8NH48 314 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 OR52E5Q8NH55 327 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 SSMEM1Q8WWF3 244 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 DCUN1D4Q92564 292 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 PPP1R14BQ96C90 147 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 WDR89Q96FK6 387 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 RBM14Q96PK6 669 aaKnown RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 CIB3Q96Q77 187 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 RASL11BQ9BPW5 248 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 PLEKHA3Q9HB20 300 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 TMEM14BQ9NUH8 114 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 MBD2Q9UBB5 411 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 HSPB7Q9UBY9 170 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 ZNF257Q9Y2Q1 563 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 FLNAP21333 2647 aaKnown RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 TRAV14DV4A0A0A6YYC5 116 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 M0QZK8 103 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 FGF16O43320 207 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 SYNGR2O43760 224 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 SSSCA1O60232 199 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 GPR137BO60478 399 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 DEDDO75618 318 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 LY86O95711 162 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 CA2P00918 260 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 IGHV4-59P01825 116 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 IAPPP10997 89 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 NUP62P37198 522 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-208ENST00000520561 RPL27AP46776 148 aaKnown RBP7.14□□□□□ -1.27
CSMD1-208ENST00000520561 HSPE1P61604 102 aaKnown RBP7.14□□□□□ -1.27
CSMD1-208ENST00000520561 POLR2GP62487 172 aaKnown RBP eCLIP7.14□□□□□ -1.27
CSMD1-208ENST00000520561 PRCDQ00LT1 54 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 ID3Q02535 119 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 FBLN7Q53RD9 439 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 C11orf87Q6NUJ2 197 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 SIGLECL1Q8N7X8 197 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 Q8N9W7 124 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 OR1L8Q8NGR8 309 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 PIFOQ8TCI5 191 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 DTD1Q8TEA8 209 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 ZNF48Q96MX3 618 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-208ENST00000520561 RAB40CQ96S21 281 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 HINT2Q9BX68 163 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 MAGT1Q9H0U3 335 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 RBKSQ9H477 322 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 PRDM13Q9H4Q3 707 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 VPS13CQ709C8 3753 aa7.14□□□□□ -1.27
CSMD1-208ENST00000520561 ASH1LQ9NR48 2969 aaKnown RBP7.14□□□□□ -1.27
CSMD1-208ENST00000520561 A0A1W2PN81 502 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 E5RGE8 158 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 G3V3Q6 166 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 BOLA2-SMG1P6H3BVE0 249 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 CNIH1O95406 144 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 HLA-DRB1P01911 266 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 OPN1MWP04001 364 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 OPN1MW2P0DN77 364 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 OPN1MW3P0DN78 364 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 SLC25A4P12235 298 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 CHRNA7P36544 502 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 IER3P46695 156 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 COMPP49747 757 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-208ENST00000520561 RPL23AP62750 156 aaKnown RBP7.13□□□□□ -1.27
CSMD1-208ENST00000520561 SPINK9Q5DT21 86 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 C10orf55Q5SWW7 151 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 NOXA1Q86UR1 476 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 TMEM86BQ8N661 226 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 C5orf56Q8N8D9 126 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 ABHD5Q8WTS1 349 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 HYLS1Q96M11 299 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 HIPK2Q9H2X6 1198 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 PLSCR3Q9NRY6 295 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 TNFRSF19Q9NS68 423 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 OR5AC2Q9NZP5 309 aa7.13□□□□□ -1.27
CSMD1-208ENST00000520561 TEX50A0A1B0GTY4 177 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 HOXA3O43365 443 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 CHST1O43916 411 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 TSC22D2O75157 780 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 LYL1P12980 280 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 MYOD1P15172 320 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 P2RY1P47900 373 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 EIF2B2P49770 351 aaKnown RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 CAV2P51636 162 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 TAS2R30P59541 319 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 RPP30P78346 268 aaKnown RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 PJVKQ0ZLH3 352 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 PDLIM3Q53GG5 364 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 Q5BKY6 102 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 ZNF562Q6V9R5 426 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 Q71RC1 249 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 INO80EQ8NBZ0 244 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 GRPEL2Q8TAA5 225 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 SRSF12Q8WXF0 261 aaKnown RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 ARPC1AQ92747 370 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 HEYLQ9NQ87 328 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-208ENST00000520561 ZC4H2Q9NQZ6 224 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 PSENENQ9NZ42 101 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms