RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NUPR1O60356 82 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 NPIPB7O75200 414 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 DEDDO75618 318 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR2J2O76002 312 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 VAMP5O95183 116 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 AHSA1O95433 338 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CYB5R3P00387 301 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGHMP01871 453 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 BGLAPP02818 100 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGKV3-11P04433 115 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 IFNA6P05013 189 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ISG15P05161 165 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 DCNP07585 359 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ERCC1P07992 297 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPIAL4GP0DN37 164 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TCN2P20062 427 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ALOX5APP20292 161 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 GZMHP20718 246 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 FUT3P21217 361 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 AK4P27144 223 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR10J1P30954 320 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 GDI1P31150 447 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPP1CCP36873 323 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TAGLN2P37802 199 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR3A4PP47883 348 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 P2RY1P47900 373 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPL29P47914 159 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 LGALS7P47929 136 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TFPI2P48307 235 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 POLR2HP52434 150 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 BIDP55957 195 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 UBE2G2P60604 165 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ERVS71-1P61550 626 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 GNB2P62879 340 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 H3F3AP84243 136 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF117Q03924 483 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 FZD2Q14332 565 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 NSDHLQ15738 373 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ATP6V1FQ16864 119 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OCIAD2Q56VL3 154 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM128Q5BJH2 165 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OPN5Q6U736 354 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 Q6ZSR6 202 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 SMIM15Q7Z3B0 74 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM144Q7Z5S9 345 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMED4Q7Z7H5 227 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 HMGN2P46Q86SG4 172 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF100Q8IYN0 542 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CEND1Q8N111 149 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAM71E2Q8N5Q1 922 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CYB561A3Q8NBI2 242 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 PLPP5Q8NEB5 264 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR5T1Q8NG75 326 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR51D1Q8NGF3 324 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR10AC1Q8NH08 325 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4K13Q8NH42 304 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CLDND2Q8NHS1 167 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CCL4L1Q8NHW4 92 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 DCUN1D4Q92564 292 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAM3DQ96BQ1 224 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZMYND19Q96E35 227 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TVP23CQ96ET8 276 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC35E1Q96K37 410 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 Q96M85 177 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TP53RKQ96S44 253 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 NMNAT3Q96T66 252 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TBX5Q99593 518 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 AGMATQ9BSE5 352 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 KCNJ16Q9NPI9 418 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 FKBP11Q9NYL4 201 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRM2Q9UI43 246 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 NAGKQ9UJ70 344 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 RAB22AQ9UL26 194 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPH3ALQ9UNE2 315 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ST3GAL6Q9Y274 331 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 NOP16Q9Y3C1 178 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPIAL4AQ9Y536 164 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 SRCAPQ6ZRS2 3230 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRAV36DV7A0A075B6V5 113 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPIAL4EA0A075B759 164 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRAV30A0A087WSZ9 112 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGHV7-81A0A0B4J1V7 117 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPIAL4CA0A0B4J2A2 164 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 LOC102725191A0A1B0GVB3 256 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 C20orf202A1L168 122 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 XKRY2A2RUG3 117 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR6C6A6NF89 314 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 EEF1E1-BLOC1S5C9J1V9 151 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPIAL4DF5H284 164 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CLDN34H7C241 214 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 XKRYO14609 159 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 HCRTR1O43613 425 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 RAMP3O60896 148 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 SCGB2A1O75556 95 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 KLF8O95600 359 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 CSTAP01040 98 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 STATHP02808 62 aa2.28□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGHV4-34P06331 123 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms