RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 OR5AK3PQ8NH89 298 aa-0.37□□□□□ -2.47
RNU6-1088P-201ENST00000516850 CCL13Q99616 98 aa-0.37□□□□□ -2.47
RNU6-1088P-201ENST00000516850 MROQ9BYG7 248 aa-0.37□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ACER3Q9NUN7 267 aa-0.37□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ENPP5Q9UJA9 477 aa-0.37□□□□□ -2.47
RNU6-1088P-201ENST00000516850 PRELID1Q9Y255 219 aa-0.37□□□□□ -2.47
RNU6-1088P-201ENST00000516850 A0A0D9SG42 100 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 C5orf49A4QMS7 147 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 NEMFO60524 1076 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ASAH2BP0C7U1 165 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 HLA-DMBP28068 263 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 RAB13P51153 203 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 SMAGPQ0VAQ4 97 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 KCNJ8Q15842 424 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 SPINK6Q6UWN8 80 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 PHF13Q86YI8 300 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 EXOC3-AS1Q8N2X6 119 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 OR4D11Q8NGI4 311 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 OR10D3Q8NH80 312 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 STOML3Q8TAV4 291 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 C11orf40Q8WZ69 217 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ANKRD7Q92527 254 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 CCDC124Q96CT7 223 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 GNPNAT1Q96EK6 184 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 SLC50A1Q9BRV3 221 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 MRM2Q9UI43 246 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 COL1A1P02452 1464 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 SCN3AQ9NY46 2000 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 MAP3K19Q56UN5 1328 aa-0.38□□□□□ -2.47
RNU6-1088P-201ENST00000516850 TMED7-TICAM2A0A0A6YYA0 188 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 OR1I1O60431 355 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 TPM2P07951 284 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 MIPP30301 263 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 HLA-DRB3P79483 266 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 RBM48Q5RL73 367 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ZNF550Q7Z398 422 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 LINC00311Q8N616 119 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 TMEM251Q8N6I4 163 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ATP6V1C2Q8NEY4 427 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 OR1M1Q8NGA1 313 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ANKRD36BP1Q96IX9 119 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 SERPINB11Q96P15 392 aa-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 RSL24D1Q9UHA3 163 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 HRNRQ86YZ3 2850 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1088P-201ENST00000516850 A0A1W2PP64 1363 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 TRBV6-8A0A0A6YYG3 113 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 GGT3PA6NGU5 568 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 APOMO95445 188 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 FADS2O95864 444 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 IGHV3-7P01780 117 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ZNF25P17030 456 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 S100A7P31151 101 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 OR4D2P58180 307 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 SAPCD1Q5SSQ6 148 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 LCN15Q6UWW0 184 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ZNF826PQ6ZT77 177 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 BCL7BQ9BQE9 202 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 OR8D2Q9GZM6 311 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 ASCL3Q9NQ33 180 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 RASL12Q9NYN1 266 aa-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 DMBT1Q9UGM3 2413 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1088P-201ENST00000516850 LRPPRCP42704 1394 aaKnown RBP-0.41□□□□□ -2.47
RNU6-1088P-201ENST00000516850 TMEM94Q12767 1356 aa-0.41□□□□□ -2.47
RNU6-1088P-201ENST00000516850 MTUS2Q5JR59 1369 aa-0.41□□□□□ -2.47
RNU6-1088P-201ENST00000516850 GOLGA8QA0A0J9YX86 632 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 OR2T8A6NH00 312 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 C2orf70A6NJV1 201 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 STX10O60499 249 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 NOS1APO75052 506 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 KDELR1P24390 212 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 POLR2GP62487 172 aaKnown RBP eCLIP-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 RPS24P62847 133 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 SUPT4H1P63272 117 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 PDE6HQ13956 83 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 MPV17LQ2QL34 196 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 BLIDQ8IZY5 108 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 OR7G1Q8NGA0 311 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 TMEM106AQ96A25 262 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 PPCDCQ96CD2 204 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 PRRT1Q99946 306 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 HRASLSQ9HDD0 168 aa-0.41□□□□□ -2.48
RNU6-1088P-201ENST00000516850 PTPRZ1P23471 2315 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 TEX50A0A1B0GTY4 177 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 I3L521 148 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 KCNK1O00180 336 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 YEATS4O95619 227 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 C1QAP02745 245 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 SLC35E2BP0CK96 405 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 CXCL2P19875 107 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 CXCL3P19876 107 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 RPS4Y1P22090 263 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 CD151P48509 253 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 ZNF80P51504 273 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 STX3Q13277 289 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 DNAL1Q4LDG9 190 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 SPANXN5Q5MJ07 72 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 SOSTDC1Q6X4U4 206 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 RNASEH2CQ8TDP1 164 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 RBP7Q96R05 134 aa-0.42□□□□□ -2.48
RNU6-1088P-201ENST00000516850 TIPINQ9BVW5 301 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms