RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 LPCAT3Q6P1A2 487 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 SLC38A6Q8IZM9 456 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 DIRAS2Q96HU8 199 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 ZNF257Q9Y2Q1 563 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
SERF1B-208ENST00000515588 FAM223BA6NKX1 122 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 MARCH11A6NNE9 402 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 NOL3O60936 208 aaKnown RBP12.07□□□□□ -0.48
SERF1B-208ENST00000515588 OR2J3O76001 311 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 KRASP01116 189 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 IFNA6P05013 189 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 CRYGCP07315 174 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 TBPP20226 339 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 G6PCP35575 357 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 ECI1P42126 302 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 INSL3P51460 131 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 ZNF429Q86V71 674 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 SLC25A42Q86VD7 318 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 FAM223AQ8IWN6 122 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 ARRDC1Q8N5I2 433 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 PRR25Q96S07 402 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 C6orf62Q9GZU0 229 aaPredicted RBP12.07□□□□□ -0.48
SERF1B-208ENST00000515588 NXF2Q9GZY0 626 aaKnown RBP12.07□□□□□ -0.48
SERF1B-208ENST00000515588 PEF1Q9UBV8 284 aaKnown RBP12.07□□□□□ -0.48
SERF1B-208ENST00000515588 COL7A1Q02388 2944 aa12.07□□□□□ -0.48
SERF1B-208ENST00000515588 IGLC7A0M8Q6 106 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 SAP30O75446 220 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 IGKV1-39P01597 117 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 IGKV1D-39P04432 117 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 REG1AP05451 166 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 CTRB1P17538 263 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 PI3P19957 117 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 ZP3P21754 424 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 PSMB6P28072 239 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 ERVK-16P61578 105 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
SERF1B-208ENST00000515588 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 EXOSC2Q13868 293 aaKnown RBP12.06□□□□□ -0.48
SERF1B-208ENST00000515588 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
SERF1B-208ENST00000515588 IL18Q14116 193 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 KLK9Q2XQG4 91 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 CTRB2Q6GPI1 263 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 NECAP1Q8NC96 275 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 MRGPRFQ96AM1 343 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 SOSTQ9BQB4 213 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 RBM38Q9H0Z9 239 aaKnown RBP12.06□□□□□ -0.48
SERF1B-208ENST00000515588 ZMAT5Q9UDW3 170 aaKnown RBP12.06□□□□□ -0.48
SERF1B-208ENST00000515588 KLK9Q9UKQ9 250 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 SORL1Q92673 2214 aa12.06□□□□□ -0.48
SERF1B-208ENST00000515588 DPPA5A6NC42 116 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 CTDSPLO15194 276 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 RAB3DO95716 219 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 FGF2P09038 288 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 PGAM2P15259 253 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 TNFSF8P32971 234 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 TAS2R19P59542 299 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 SSBP1Q04837 148 aaKnown RBP12.05□□□□□ -0.48
SERF1B-208ENST00000515588 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 FAAP20Q6NZ36 180 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 STEAP1BQ6NZ63 245 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 CADM3Q8N126 398 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
SERF1B-208ENST00000515588 FBXL7Q9UJT9 491 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
SERF1B-208ENST00000515588 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.04□□□□□ -0.48
SERF1B-208ENST00000515588 TEX50A0A1B0GTY4 177 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 DBX1A6NMT0 343 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 BMPR1BO00238 502 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 NDUFB8O95169 186 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 PTBP1P26599 531 aaKnown RBP eCLIP12.04□□□□□ -0.48
SERF1B-208ENST00000515588 S100GP29377 79 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 PPP5CP53041 499 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 SYNJ2BPP57105 145 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 RND3P61587 244 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 IL34Q6ZMJ4 242 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 TERB2Q8NHR7 220 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 MCFD2Q8NI22 146 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 SEC22AQ96IW7 307 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
SERF1B-208ENST00000515588 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
SERF1B-208ENST00000515588 DMRT1Q9Y5R6 373 aa12.04□□□□□ -0.48
SERF1B-208ENST00000515588 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 PIGPP57054 158 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 WT1-ASQ06250 92 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 SCGB2B2Q4G0G5 96 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 OR13C8Q8NGS7 320 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 ZNF486Q96H40 463 aaPredicted RBP12.03□□□□□ -0.48
SERF1B-208ENST00000515588 SRSF8Q9BRL6 282 aaKnown RBP12.03□□□□□ -0.48
SERF1B-208ENST00000515588 NDUFA4L2Q9NRX3 87 aa12.03□□□□□ -0.48
SERF1B-208ENST00000515588 RABL2AQ9UBK7 228 aaPredicted RBP12.03□□□□□ -0.48
SERF1B-208ENST00000515588 RABL2BQ9UNT1 228 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms