RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 ARRDC1Q8N5I2 433 aa13.65□□□□□ -0.22
DDR1-272ENST00000513243 AKIP1Q9NQ31 210 aa13.65□□□□□ -0.22
DDR1-272ENST00000513243 ZNF257Q9Y2Q1 563 aa13.65□□□□□ -0.22
DDR1-272ENST00000513243 TGP01266 2768 aa13.65□□□□□ -0.22
DDR1-272ENST00000513243 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
DDR1-272ENST00000513243 NPIPB5A8MRT5 1133 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 CD74P04233 296 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 AREGP15514 252 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 S100GP29377 79 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 TAS2R19P59542 299 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 OR2B8PP59922 312 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 ERVK-16P61578 105 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 C19orf35Q6ZS72 473 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 TBC1D26Q86UD7 250 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 SLC25A42Q86VD7 318 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 SMIM4Q8WVI0 70 aa13.64□□□□□ -0.23
DDR1-272ENST00000513243 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
DDR1-272ENST00000513243 DPPA5A6NC42 116 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 FAM223BA6NKX1 122 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 MARCH11A6NNE9 402 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 CTDSPLO15194 276 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 RAB3DO95716 219 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 KRASP01116 189 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 TRBV12-3P01733 135 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 TNFSF8P32971 234 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 SSBP1Q04837 148 aaKnown RBP13.63□□□□□ -0.23
DDR1-272ENST00000513243 IL18Q14116 193 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 STEAP1BQ6NZ63 245 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 FAM223AQ8IWN6 122 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 NECAP1Q8NC96 275 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 MCFD2Q8NI22 146 aa13.63□□□□□ -0.23
DDR1-272ENST00000513243 PEF1Q9UBV8 284 aaKnown RBP13.63□□□□□ -0.23
DDR1-272ENST00000513243 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
DDR1-272ENST00000513243 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 OR2J3O76001 311 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 CRYGCP07315 174 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 FGF2P09038 288 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 PGAM2P15259 253 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 PI3P19957 117 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 ZP3P21754 424 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 PSMB6P28072 239 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 G6PCP35575 357 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 ECI1P42126 302 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 INSL3P51460 131 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 ATP5G2Q06055 141 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 ACSM6Q6P461 480 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 CADM3Q8N126 398 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 TERB2Q8NHR7 220 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 SOSTQ9BQB4 213 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 COMMD5Q9GZQ3 224 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 RBM38Q9H0Z9 239 aaKnown RBP13.62□□□□□ -0.23
DDR1-272ENST00000513243 FAM212BQ9NTI7 297 aaPredicted RBP13.62□□□□□ -0.23
DDR1-272ENST00000513243 RABL2AQ9UBK7 228 aaPredicted RBP13.62□□□□□ -0.23
DDR1-272ENST00000513243 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
DDR1-272ENST00000513243 REG1AP05451 166 aa13.61□□□□□ -0.23
DDR1-272ENST00000513243 CTRB1P17538 263 aa13.61□□□□□ -0.23
DDR1-272ENST00000513243 DEFB121Q5J5C9 76 aa13.61□□□□□ -0.23
DDR1-272ENST00000513243 CTRB2Q6GPI1 263 aa13.61□□□□□ -0.23
DDR1-272ENST00000513243 ZNF429Q86V71 674 aa13.61□□□□□ -0.23
DDR1-272ENST00000513243 FANCD2OSQ96PS1 177 aa13.61□□□□□ -0.23
DDR1-272ENST00000513243 TEX50A0A1B0GTY4 177 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 IGLC7A0M8Q6 106 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 SAP30O75446 220 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 PPP5CP53041 499 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 PIGPP57054 158 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 RND3P61587 244 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 EXOSC2Q13868 293 aaKnown RBP13.6□□□□□ -0.23
DDR1-272ENST00000513243 KLF5Q13887 457 aaPredicted RBP13.6□□□□□ -0.23
DDR1-272ENST00000513243 KLK9Q2XQG4 91 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 C15orf32Q32M92 178 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 SCGB2B2Q4G0G5 96 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 FAAP20Q6NZ36 180 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 MRGPRFQ96AM1 343 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 ZNF486Q96H40 463 aaPredicted RBP13.6□□□□□ -0.23
DDR1-272ENST00000513243 QTRT1Q9BXR0 403 aaKnown RBP13.6□□□□□ -0.23
DDR1-272ENST00000513243 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 KLK9Q9UKQ9 250 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 NSG2Q9Y328 171 aa13.6□□□□□ -0.23
DDR1-272ENST00000513243 FABP12A6NFH5 140 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 GSTZ1O43708 216 aaPredicted RBP13.59□□□□□ -0.23
DDR1-272ENST00000513243 NDUFB8O95169 186 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 PTBP1P26599 531 aaKnown RBP eCLIP13.59□□□□□ -0.23
DDR1-272ENST00000513243 MEF2DQ14814 521 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 OR10W1Q8NGF6 305 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 OR13C8Q8NGS7 320 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 PRR25Q96S07 402 aa13.59□□□□□ -0.23
DDR1-272ENST00000513243 SRSF8Q9BRL6 282 aaKnown RBP13.59□□□□□ -0.23
DDR1-272ENST00000513243 RSL24D1Q9UHA3 163 aaKnown RBP13.59□□□□□ -0.23
DDR1-272ENST00000513243 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.58□□□□□ -0.24
DDR1-272ENST00000513243 BMPR1BO00238 502 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 SNAPC5O75971 98 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 DHFRP00374 187 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 TRAPPC2P0DI81 140 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 TRAPPC2BP0DI82 140 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 DEFA4P12838 97 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
DDR1-272ENST00000513243 OR4C16Q8NGL9 310 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms