RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 PMAIP1Q13794 54 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 BATFQ16520 125 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 OR5B17Q8NGF7 314 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 SLC35B4Q969S0 331 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 MRPS26Q9BYN8 205 aaKnown RBP1.13□□□□□ -2.23
CHD1-207ENST00000511628 CISHQ9NSE2 258 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 NAT8Q9UHE5 227 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 AK3Q9UIJ7 227 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 ANGPT4Q9Y264 503 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 TIMM22Q9Y584 194 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 RGS12O14924 1447 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 NUP160Q12769 1436 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 HEATR5AQ86XA9 2040 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 DOCK10Q96BY6 2186 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 CCDC88CQ9P219 2028 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 TRAV7A0A075B6U4 112 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 IGHV1-18A0A0C4DH31 117 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 TRAPPC2LH3BP13 241 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 ZNF737O75373 536 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 PPBPP02775 128 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 UCHL3P15374 230 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 HLA-DMBP28068 263 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 S100A7P31151 101 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 CSN1S1P47710 185 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 EVX1P49640 407 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 AQP4P55087 323 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 OR4D2P58180 307 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 TMEM155Q4W5P6 130 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 LPCAT4Q643R3 524 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 LYZL1Q6UWQ5 148 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 ZNF705AQ6ZN79 300 aaPredicted RBP1.12□□□□□ -2.23
CHD1-207ENST00000511628 C1orf158Q8N1D5 194 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 TBC1D19Q8N5T2 526 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 ACOT12Q8WYK0 555 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 ANKRD7Q92527 254 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 TMA16Q96EY4 203 aaKnown RBP1.12□□□□□ -2.23
CHD1-207ENST00000511628 CNBD2Q96M20 576 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 PKIGQ9Y2B9 76 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 FN1P02751 2386 aaKnown RBP1.12□□□□□ -2.23
CHD1-207ENST00000511628 MYO3BQ8WXR4 1341 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 CCDC88AQ3V6T2 1871 aa1.12□□□□□ -2.23
CHD1-207ENST00000511628 FBN3Q75N90 2809 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 IGKV1D-43A0A0B4J1Z2 117 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 TRAV38-1A0A0B4J264 116 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 A0A0J9YY10 115 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 A0A1B0GW54 56 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 A0A1B0GX78 115 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 H7C2G1 150 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 C1QCP02747 245 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 PRB1P04280 392 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 SRP19P09132 144 aaKnown RBP1.11□□□□□ -2.23
CHD1-207ENST00000511628 OR5G3P0C626 314 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 TMEM258P61165 79 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 AP1S1P61966 158 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 POLR2GP62487 172 aaKnown RBP eCLIP1.11□□□□□ -2.23
CHD1-207ENST00000511628 KISS1Q15726 138 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 HIST2H3PS2Q5TEC6 136 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 SYPL2Q5VXT5 272 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 KTN1-AS1Q86SY8 53 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 PPP1R2P1Q96PQ5 205 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 TP73-AS1Q9UF72 201 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 FUT9Q9Y231 359 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 LSM5Q9Y4Y9 91 aaKnown RBP1.11□□□□□ -2.23
CHD1-207ENST00000511628 TIMM9Q9Y5J7 89 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 DCCP43146 1447 aa1.11□□□□□ -2.23
CHD1-207ENST00000511628 HECW2Q9P2P5 1572 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 ZFYVE9O95405 1425 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 A0A0D9SEW6 157 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 CHP2O43745 196 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 NAPSAO96009 420 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 IFNA16P05015 189 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 RPS17P08708 135 aaKnown RBP1.1□□□□□ -2.23
CHD1-207ENST00000511628 ZNF705DP0CH99 300 aaPredicted RBP1.1□□□□□ -2.23
CHD1-207ENST00000511628 KCNE1P15382 129 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 DEFA1P59665 94 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 SPCS3P61009 180 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 GLO1Q04760 184 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 AKR1C1Q04828 323 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 HIST3H3Q16695 136 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 CCDC122Q5T0U0 273 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 FAM27BQ5VT28 67 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 DCXRQ7Z4W1 244 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 DYNAPQ8N1N2 210 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 ROPN1LQ96C74 230 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 HSPB9Q9BQS6 159 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 EFCAB1Q9HAE3 211 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 XAGE1AQ9HD64 81 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 PLB1Q6P1J6 1458 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 CR1P17927 2039 aa1.1□□□□□ -2.23
CHD1-207ENST00000511628 FLT4P35916 1363 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 WRNQ14191 1432 aaPredicted RBP eCLIP1.09□□□□□ -2.23
CHD1-207ENST00000511628 HECW1Q76N89 1606 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 TRBV20OR9-2A0A075B6H5 130 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 GGT3PA6NGU5 568 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 M0R036 132 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 CREBL2O60519 120 aaPredicted RBP1.09□□□□□ -2.23
CHD1-207ENST00000511628 SERPINA6P08185 405 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 MSNP26038 577 aaKnown RBP1.09□□□□□ -2.23
CHD1-207ENST00000511628 PSMB8P28062 276 aa1.09□□□□□ -2.23
CHD1-207ENST00000511628 LSM6P62312 80 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms