RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 ZCCHC13Q8WW36 166 aaKnown RBP0.84□□□□□ -2.27
SMN2-208ENST00000508258 FGF13Q92913 245 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 DCUN1D1Q96GG9 259 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 DNAJC30Q96LL9 226 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 TSPAN32Q96QS1 320 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 CXCL16Q9H2A7 254 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 FAM96AQ9H5X1 160 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 CISHQ9NSE2 258 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 PAQR5Q9NXK6 330 aaPredicted RBP0.84□□□□□ -2.27
SMN2-208ENST00000508258 IL20Q9NYY1 176 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 IDI2-AS1Q9NZ38 188 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 PRO2289Q9P1D8 64 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 RSL24D1Q9UHA3 163 aaKnown RBP0.84□□□□□ -2.27
SMN2-208ENST00000508258 FBXO5Q9UKT4 447 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 PRELID3BQ9Y3B1 194 aa0.84□□□□□ -2.27
SMN2-208ENST00000508258 NEO1Q92859 1461 aa0.84□□□□□ -2.28
SMN2-208ENST00000508258 KDM5BQ9UGL1 1544 aa0.84□□□□□ -2.28
SMN2-208ENST00000508258 ROBO3Q96MS0 1386 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 ZNF638Q14966 1978 aaKnown RBP0.83□□□□□ -2.28
SMN2-208ENST00000508258 HECW1Q76N89 1606 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 IGKV1D-43A0A0B4J1Z2 117 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TRAV26-2A0A0B4J265 109 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 A0A0J9YW62 118 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TMEM269A0A1B0GVZ9 245 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 OR4C46A6NHA9 309 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 ZNF878C9JN71 531 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 I3L521 148 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TXNDC9O14530 226 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 LEPROTO15243 131 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 C1QAP02745 245 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 BPGMP07738 259 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 CST2P09228 141 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 UCHL1P09936 223 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 ZNF705DP0CH99 300 aaPredicted RBP0.83□□□□□ -2.28
SMN2-208ENST00000508258 CYBAP13498 195 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 S100A7P31151 101 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 CSN1S1P47710 185 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 RPS20P60866 119 aaKnown RBP0.83□□□□□ -2.28
SMN2-208ENST00000508258 AP1S1P61966 158 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 ARF6P62330 175 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 AKR1C1Q04828 323 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 CDK10Q15131 360 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 GRK1Q15835 563 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 ZNF181Q2M3W8 571 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 PABPC1L2AQ5JQF8 200 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TMEM42Q69YG0 159 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 AGTRAPQ6RW13 159 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 SLC35F6Q8N357 371 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TBC1D19Q8N5T2 526 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 CDC26Q8NHZ8 85 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 PHOSPHO2Q8TCD6 241 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 BORCS7Q96B45 105 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 PAIP2Q9BPZ3 127 aaKnown RBP0.83□□□□□ -2.28
SMN2-208ENST00000508258 CCDC94Q9BW85 323 aaPredicted RBP0.83□□□□□ -2.28
SMN2-208ENST00000508258 OR8D2Q9GZM6 311 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 WDR61Q9GZS3 305 aaKnown RBP0.83□□□□□ -2.28
SMN2-208ENST00000508258 EFCAB1Q9HAE3 211 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 PRTFDC1Q9NRG1 225 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 FBXL12Q9NXK8 326 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 IL36BQ9NZH7 164 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 DOK5Q9P104 306 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 FUT9Q9Y231 359 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TMEM56-RWDD3S4R434 201 aa0.83□□□□□ -2.28
SMN2-208ENST00000508258 TRIOBPQ9H2D6 2365 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TRAV7A0A075B6U4 112 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 hADV38S2A0JD32 116 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 FAM159BA6NKW6 160 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 LY6LH3BQJ8 138 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 NOS1APO75052 506 aaPredicted RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 SERPINA1P01009 418 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 IGKV1-5P01602 117 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 PRM2P04554 102 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 LGALS1P09382 135 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 TFPTP0C1Z6 253 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 CBR1P16152 277 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 CSRP1P21291 193 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 G6PCP35575 357 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 RPL28P46779 137 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 EVX1P49640 407 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TPI1P60174 286 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 RAB14P61106 215 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 CCL20P78556 96 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 BASP1P80723 227 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 MRPS25P82663 173 aaKnown RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 ZNF90Q03938 601 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 HES1Q14469 280 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TMED2Q15363 201 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 KCNJ8Q15842 424 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 TPRXLQ17RH7 258 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 C9orf64Q5T6V5 341 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 LYZL1Q6UWQ5 148 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 Q6ZS52 159 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 SLC35E3Q7Z769 313 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 C12orf45Q8N5I9 185 aaPredicted RBP0.82□□□□□ -2.28
SMN2-208ENST00000508258 ANKRD29Q8N6D5 301 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 Q8NDZ9 215 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 OR52L1Q8NGH7 329 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 OR51T1Q8NGJ9 327 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 OR13C4Q8NGS5 318 aa0.82□□□□□ -2.28
SMN2-208ENST00000508258 OR5J2Q8NH18 312 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms