RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 C3orf85A0A1B0GTC6 90 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 HMX3A6NHT5 357 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 CGB1A6NKQ9 187 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 OR9G9P0C7N8 305 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 RPL27AP46776 148 aaKnown RBP14.13□□□□□ -0.15
NPHP4-210ENST00000506941 DEFB136Q30KP8 78 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 SP6Q3SY56 376 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 TRIQKQ629K1 86 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 ADAD2Q8NCV1 583 aaKnown RBP14.13□□□□□ -0.15
NPHP4-210ENST00000506941 DEDD2Q8WXF8 326 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 TMEM230Q96A57 120 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 TMEM68Q96MH6 324 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 MS4A10Q96PG2 267 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 SPIN2AQ99865 258 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 SPIN2BQ9BPZ2 258 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 PTTG2Q9NZH5 202 aa14.13□□□□□ -0.15
NPHP4-210ENST00000506941 NOTCH3Q9UM47 2321 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 SERPINE2P07093 398 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 IL7P13232 177 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 CADM3Q8N126 398 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 C4orf3Q8WVX3 66 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 RAX2Q96IS3 184 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 UBE2E2Q96LR5 201 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 DUX3Q96PT4 197 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 FYTTD1Q96QD9 318 aaKnown RBP14.12□□□□□ -0.15
NPHP4-210ENST00000506941 NAA60Q9H7X0 242 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 NSG2Q9Y328 171 aa14.12□□□□□ -0.15
NPHP4-210ENST00000506941 MEGF8Q7Z7M0 2845 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 CRYM-AS1A6NIL9 109 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 RBMXL2O75526 392 aaKnown RBP14.11□□□□□ -0.15
NPHP4-210ENST00000506941 FGF2P09038 288 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 OR5AC1P0C628 307 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 UCP1P25874 307 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 SLC6A1P30531 599 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 TPPP2P59282 170 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 OR2B8PP59922 312 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 DEFA5Q01523 94 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 C19orf35Q6ZS72 473 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 LINC00299Q6ZSB3 139 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 COA4Q9NYJ1 87 aa14.11□□□□□ -0.15
NPHP4-210ENST00000506941 TEX13DA0A0J9YY54 714 aaPredicted RBP14.1□□□□□ -0.15
NPHP4-210ENST00000506941 DBX1A6NMT0 343 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 H3BUA1 57 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 I3L521 148 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 IGKV1-5P01602 117 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 PF4P02776 101 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 TRGV3P03979 118 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 P0C879 139 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 AREGP15514 252 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 TTC9CQ8N5M4 171 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 LHFPL5Q8TAF8 219 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 GLYATL2Q8WU03 294 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 OR5B12Q96R08 314 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 TMEM222Q9H0R3 208 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 SLA2Q9H6Q3 261 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 ZNF355PQ9NSJ1 428 aa14.1□□□□□ -0.15
NPHP4-210ENST00000506941 DNAH3Q8TD57 4116 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 TEX50A0A1B0GTY4 177 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 LINC00854A0A1B0GVQ3 168 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 BRI3O95415 125 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 PRH1P02810 166 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 INPP1P49441 399 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 CCR6P51684 374 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 IZUMO4Q1ZYL8 232 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 LINC00482Q8N8I6 264 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 SCGB3A2Q96PL1 93 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 P2RX4Q99571 388 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 COMMD5Q9GZQ3 224 aa14.09□□□□□ -0.15
NPHP4-210ENST00000506941 ALX4Q9H161 411 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-210ENST00000506941 IGLC7A0M8Q6 106 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 C15orf61A6NNL5 157 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 CCL24O00175 119 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 B3GALNT1O75752 331 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 IGHV3-11P01762 117 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 CD40LGP29965 261 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 BTCP35070 178 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 SUPT4H1P63272 117 aaKnown RBP14.08□□□□□ -0.16
NPHP4-210ENST00000506941 RUNX1Q01196 453 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 TRIM16LQ309B1 348 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 H2BFWTQ7Z2G1 175 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 MRPL41Q8IXM3 137 aaKnown RBP14.08□□□□□ -0.16
NPHP4-210ENST00000506941 OR10W1Q8NGF6 305 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 QTRT1Q9BXR0 403 aaKnown RBP14.08□□□□□ -0.16
NPHP4-210ENST00000506941 TMEM14BQ9NUH8 114 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 OR51B2Q9Y5P1 312 aa14.08□□□□□ -0.16
NPHP4-210ENST00000506941 A0A0G2JRQ6 117 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 NPIPB5A8MRT5 1133 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 SNAPC5O75971 98 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 CDS2O95674 445 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 REG1AP05451 166 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 AKR1C4P17516 323 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 MYCNOSP40205 109 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 FHL3Q13643 280 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 GALNT14Q96FL9 552 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 NDUFA4L2Q9NRX3 87 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 PRR13Q9NZ81 148 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 PRNDQ9UKY0 176 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 ZNF257Q9Y2Q1 563 aa14.07□□□□□ -0.16
NPHP4-210ENST00000506941 TRBV9A0A0B4J1U6 114 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 NAP1L6A6NFF2 107 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms