RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 FGFR1OP2Q9NVK5 253 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 PLEKHJ1Q9NW61 149 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 USE1Q9NZ43 259 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RSL24D1Q9UHA3 163 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 DKKL1Q9UK85 242 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ANAPC10Q9UM13 185 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 PRELID1Q9Y255 219 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ARFGEF3Q5TH69 2177 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ABCC11Q96J66 1382 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 KIF15Q9NS87 1388 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 POLEQ07864 2286 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 CCDC88AQ3V6T2 1871 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 SCAF11Q99590 1463 aaKnown RBP0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 IGKV2D-26A0A0A0MRZ7 120 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 IRGMA1A4Y4 181 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 TRAPPC13A5PLN9 417 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR51F1A6NGY5 319 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR4C45A6NMZ5 311 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 SDCBPO00560 298 aaPredicted RBP0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 SLC22A1O15245 554 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 SLC16A4O15374 487 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 PLA2G10O15496 165 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 CIAO1O76071 339 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 HLA-DRAP01903 254 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 C1QAP02745 245 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 TYMSP04818 313 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 METTL15P1P0C7V9 234 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 TRGC1P0CF51 173 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 C8orf88P0DMB2 117 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 REG1BP48304 166 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 CD151P48509 253 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 AQP4P55087 323 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 RAB14P61106 215 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 TPM4P67936 248 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 CTAG1AP78358 180 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 PPP1R1AQ13522 171 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 ARHGAP11BQ3KRB8 267 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 GLT8D1Q68CQ7 371 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 UNQ6190/PRO20217Q6UXQ8 127 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 SSX8Q7RTT4 187 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 COMMD7Q86VX2 200 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 UMODL1-AS1Q8N2C9 162 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 PACRGLQ8N7B6 248 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 TMEM161BQ8NDZ6 487 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 GPR32P1Q8NGA4 272 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 PIGXQ8TBF5 258 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 ACOT12Q8WYK0 555 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 ANKRD7Q92527 254 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 TESCQ96BS2 214 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 DIRAS2Q96HU8 199 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 Q96M85 177 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAP1LC3AQ9H492 121 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 CXorf21Q9HAI6 301 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 IMP3Q9NV31 184 aaKnown RBP0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 NKIRAS1Q9NYS0 192 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 NAT8Q9UHE5 227 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 C3orf18Q9UK00 162 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 ANGPT4Q9Y264 503 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 RBM7Q9Y580 266 aaKnown RBP0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 RALGAPA2Q2PPJ7 1873 aa0.44□□□□□ -2.34
HMGB1P29-201ENST00000505659 ANAPC1Q9H1A4 1944 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 TRBV10-2A0A0K0K1G8 114 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 FUOMA2VDF0 154 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 C21orf140B9A014 251 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 LRRN3E7EW58 273 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 I3L521 148 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 M0QZ92 97 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 CETN3O15182 167 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 LEPROTO15243 131 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 COCHO43405 550 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 PPBPP02775 128 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 TPM3P06753 285 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 SRP19P09132 144 aaKnown RBP0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 SULT1A3P0DMM9 295 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 SULT1A4P0DMN0 295 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 KCNE1P15382 129 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 RPL12P30050 165 aaKnown RBP0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 S100A7P31151 101 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAGEA2P43356 314 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 BLVRAP53004 296 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 AP2S1P53680 142 aaPredicted RBP0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 FXYD2P54710 66 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR4D2P58180 307 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 PLCXD2Q0VAA5 305 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 CDK5R1Q15078 307 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 CDK10Q15131 360 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 RSU1Q15404 277 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 MOGQ16653 247 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 Q1T7F1 81 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 SAPCD1Q5SSQ6 148 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 C1orf194Q5T5A4 169 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 LRRN1Q6UXK5 716 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 FAM151BQ6UXP7 276 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 ZNF676Q8N7Q3 588 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 C12orf29Q8N999 325 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR8B3Q8NGG8 313 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 SGMS2Q8NHU3 365 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 MCFD2Q8NI22 146 aa0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 ERMAPQ96PL5 475 aaPredicted RBP0.43□□□□□ -2.34
HMGB1P29-201ENST00000505659 ADAT1Q9BUB4 502 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms