RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 HSPB11Q9Y547 144 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 NAV3Q8IVL0 2385 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 PLXNB1O43157 2135 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 ANKRD34BA5PLL1 514 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 E5RGE8 158 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 SYNGR2O43760 224 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 SLC25A17O43808 307 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 CHST1O43916 411 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 FGF2P09038 288 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 P2RY1P47900 373 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 LGALS7P47929 136 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 DYNLT3P51808 116 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 F2RL1P55085 397 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 ERVK-16P61578 105 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 RPS16P62249 146 aaKnown RBP8.29□□□□□ -1.08
TPM3-217ENST00000504663 PJVKQ0ZLH3 352 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 SPINK9Q5DT21 86 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 C10orf55Q5SWW7 151 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 CCDC144NLQ6NUI1 221 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 ZNF546Q86UE3 836 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 OR4A5Q8NH83 315 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 OR4C12Q96R67 309 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 RNF5Q99942 180 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 MFFQ9GZY8 342 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 MEGF9Q9H1U4 602 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 ZNF430Q9H8G1 570 aaPredicted RBP8.29□□□□□ -1.08
TPM3-217ENST00000504663 SIGLEC9Q9Y336 463 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 CSPG4Q6UVK1 2322 aa8.29□□□□□ -1.08
TPM3-217ENST00000504663 TEX50A0A1B0GTY4 177 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 MDFIC2A0A1B0GVS7 189 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 FAM24AA6NFZ4 105 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 OR2F2O95006 317 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 SPDEFO95238 335 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 PET100P0DJ07 73 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 IAPPP10997 89 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 SPCS3P61009 180 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 NDPQ00604 133 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 EWSR1Q01844 656 aaKnown RBP eCLIP8.28□□□□□ -1.08
TPM3-217ENST00000504663 ARL16Q0P5N6 197 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 OR2F1Q13607 317 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 PRSS8Q16651 343 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 BSXQ3C1V8 233 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 CYB5R2Q6BCY4 276 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 TMEM14EPQ6UXP3 125 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 TMUB2Q71RG4 321 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 TEX45Q8NA69 505 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 SMIM8Q96KF7 97 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 FBXL15Q9H469 300 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 WFDC1Q9HC57 220 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 ZFP57Q9NU63 452 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 ZNF257Q9Y2Q1 563 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 WSB1Q9Y6I7 421 aa8.28□□□□□ -1.08
TPM3-217ENST00000504663 ACANP16112 2415 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 C15orf62A8K5M9 175 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 PRSS46E5RG02 174 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 INS-IGF2F8WCM5 200 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 H3BP45 60 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 L7N2F9 121 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 FCN1O00602 326 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 RRHO14718 337 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 NBR2O15453 112 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 BCL2L11O43521 198 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 GPR137BO60478 399 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 TSC22D2O75157 780 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 MOSP00540 346 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 RPL12P30050 165 aaKnown RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 S100A11P31949 105 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 LGALS4P56470 323 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 TAS2R30P59541 319 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 HSPE1P61604 102 aaKnown RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 RPL8P62917 257 aaKnown RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 PRCDQ00LT1 54 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 OPCMLQ14982 345 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 VMA21Q3ZAQ7 101 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 GPR157Q5UAW9 335 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 CLEC9AQ6UXN8 241 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 BCL6BQ8N143 479 aaPredicted RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 STPG2Q8N412 459 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 OR2C3Q8N628 320 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 TMEM252Q8N6L7 170 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 OR4A16Q8NH70 328 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 RAB40CQ96S21 281 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 TSNAXQ99598 290 aaKnown RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 NDUFA4L2Q9NRX3 87 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 METTL1Q9UBP6 276 aaKnown RBP8.27□□□□□ -1.09
TPM3-217ENST00000504663 PRNDQ9UKY0 176 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 OR51B2Q9Y5P1 312 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 MXRA5Q9NR99 2828 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 TLN2Q9Y4G6 2542 aa8.27□□□□□ -1.09
TPM3-217ENST00000504663 TEX22C9J3V5 150 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 J3QL48 77 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 WRBO00258 174 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 CFDP00746 253 aaPredicted RBP8.26□□□□□ -1.09
TPM3-217ENST00000504663 NHLH2Q02577 135 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms