RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 TIMM8BQ9Y5J9 83 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 MYO7AQ13402 2215 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 UNC13CQ8NB66 2214 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 MBD3L4A6NDZ8 208 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 MBD3L3A6NE82 208 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 MBD3L5A6NJ08 208 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 C17orf100A8MU93 164 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 SIGLEC5O15389 551 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 HLA-DRB1P01911 266 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 CD40P25942 277 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 CACNG7P62955 275 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 HBBP68871 147 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 HOXA4Q00056 320 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 MMDQ15546 238 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 OR4A47Q6IF82 309 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 REC114Q7Z4M0 266 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 CBLN2Q8IUK8 224 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 PNKDQ8N490 385 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 ZNF738Q8NE65 137 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 MBD3L2Q8NHZ7 208 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 DPF1Q92782 380 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 SLX1AQ9BQ83 275 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 GNB1LQ9BYB4 327 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 RPRMQ9NS64 109 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 TMEM106BQ9NUM4 274 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 SH3BGRL2Q9UJC5 107 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 MRPS16Q9Y3D3 137 aaKnown RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 TMEM8BA6NDV4 472 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 C3orf80F5H4A9 247 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 ORM2P19652 201 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 FOXC1Q12948 553 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 PRR27Q6MZM9 219 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 SPNS3Q6ZMD2 512 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 OR4C5Q8NGB2 326 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 CHCHD1Q96BP2 118 aaKnown RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 HDHD3Q9BSH5 251 aaPredicted RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 LAMTOR2Q9Y2Q5 125 aa4□□□□□ -1.77
NDFIP1-202ENST00000503388 TBL2Q9Y4P3 447 aaKnown RBP4□□□□□ -1.77
NDFIP1-202ENST00000503388 IZUMO1RA6ND01 250 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 EPOPA6NHQ4 379 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 DIRC3C9JPN6 131 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 M0R1W7 72 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 UBE2CO00762 179 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 SCO1O75880 301 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 C1QCP02747 245 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 CECR9P0C854 216 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 MFAP2P55001 183 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 JOSD1Q15040 202 aaPredicted RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 PDCD1Q15116 288 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 NMSQ5H8A3 153 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 TMEM14EPQ6UXP3 125 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 ABHD12Q8N2K0 398 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 ZIC4Q8N9L1 334 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 MDS2Q8NDY4 140 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 NEUROG1Q92886 237 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 SPANXDQ9BXN6 97 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 SPANXA1Q9NS26 97 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 R4GN57 208 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 PPIAL4CA0A0B4J2A2 164 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 IGKV1-9A0A0C4DH69 117 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 NDUFB4O95168 129 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 IGLV3-1P01715 115 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 IL6RP08887 468 aaPredicted RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 PPIAL4GP0DN37 164 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 MYF5P13349 255 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 GATA4P43694 442 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 SPATA31B1PQ5VZV4 182 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 GGNQ86UU5 652 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 BMPERQ8N8U9 685 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 TPPP3Q9BW30 176 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 PNRC2Q9NPJ4 139 aaKnown RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 MBNL3Q9NUK0 354 aaKnown RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 LOC105371242A0A075B767 164 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 IGHV3-43A0A0B4J1X8 118 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 LOC101059948A0A1B0GTJ6 334 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 F2Z2F3 143 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 H0YL77 283 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 CCL21O00585 134 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 IGHV3-43DP0DP04 118 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 RPL11P62913 178 aaKnown RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 CD69Q07108 199 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 CT83Q5H943 113 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 C9orf152Q5JTZ5 239 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 OTPQ5XKR4 325 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 EBLN2Q6P2I7 272 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 IGFL3Q6UXB1 125 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 HEPN1Q6WQI6 88 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 BIVMQ86UB2 503 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 OR10S1Q8NGN2 331 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 Q8TCH9 128 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 TRGV9Q99603 122 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 GFI1Q99684 422 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 MRPL18Q9H0U6 180 aaKnown RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 MS4A6AQ9H2W1 248 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 SMOC1Q9H4F8 434 aa3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 RPUSD1Q9UJJ7 312 aaKnown RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 DNASE2O00115 360 aaPredicted RBP3.99□□□□□ -1.77
NDFIP1-202ENST00000503388 COX6CP09669 75 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms