RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 CD74P04233 296 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 IFNA6P05013 189 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 MAS1LP35410 378 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 SCGB2B2Q4G0G5 96 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 HAPLN4Q86UW8 402 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 SLC38A6Q8IZM9 456 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 TMEM229BQ8NBD8 167 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 OR4A5Q8NH83 315 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 SMIM4Q8WVI0 70 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 PRR25Q96S07 402 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 S4R3C0 116 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 TPPPO94811 219 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 RAB3DO95716 219 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 KRASP01116 189 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 IGKV1-39P01597 117 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 IGKV1D-39P04432 117 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 TNFSF8P32971 234 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 UCP3P55916 312 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 TAS2R19P59542 299 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 OR2B8PP59922 312 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 EXOSC2Q13868 293 aaKnown RBP13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 STEAP1BQ6NZ63 245 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 CD300LFQ8TDQ1 290 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 MRGPRFQ96AM1 343 aa13.49□□□□□ -0.25
RHBDD3-207ENST00000496342 TGP01266 2768 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 TRBV9A0A0B4J1U6 114 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 A0A0G2JLM5 398 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 BRI3O95415 125 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 IGHV3-23P01764 117 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 ECI1P42126 302 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 ERVK-16P61578 105 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 LPCAT3Q6P1A2 487 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 ZNF343Q6P1L6 599 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 ARRDC1Q8N5I2 433 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 C15orf40Q8WUR7 153 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 ZNF257Q9Y2Q1 563 aa13.48□□□□□ -0.25
RHBDD3-207ENST00000496342 IGLC7A0M8Q6 106 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 DBX1A6NMT0 343 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 NPIPB5A8MRT5 1133 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 SAP30O75446 220 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 PSMB6P28072 239 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 OR4C16Q8NGL9 310 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 OR13C8Q8NGS7 320 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 MARCH1Q8TCQ1 289 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 FANCD2OSQ96PS1 177 aa13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 RSL24D1Q9UHA3 163 aaKnown RBP13.47□□□□□ -0.25
RHBDD3-207ENST00000496342 CTDSPLO15194 276 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 NDUFB8O95169 186 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 CTRB1P17538 263 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 TBPP20226 339 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 PIGPP57054 158 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 MRPS10P82664 201 aaKnown RBP13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 C15orf32Q32M92 178 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 CTRB2Q6GPI1 263 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 ACSM6Q6P461 480 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 USMG5Q96IX5 58 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 TP53RKQ96S44 253 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 SOSTQ9BQB4 213 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 AIFM2Q9BRQ8 373 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 RANGRFQ9HD47 186 aaPredicted RBP13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 PEF1Q9UBV8 284 aaKnown RBP13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 FBXL7Q9UJT9 491 aa13.46□□□□□ -0.25
RHBDD3-207ENST00000496342 SORL1Q92673 2214 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 PPP5D1E7EU14 171 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 CRYGCP07315 174 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 SYNJ2BPP57105 145 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 SSBP1Q04837 148 aaKnown RBP13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 ATP5G2Q06055 141 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 DEFB121Q5J5C9 76 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 SLC25A42Q86VD7 318 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 SEC22AQ96IW7 307 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 HINT2Q9BX68 163 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 DMRT1Q9Y5R6 373 aa13.45□□□□□ -0.26
RHBDD3-207ENST00000496342 FABP12A6NFH5 140 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 BMPR1BO00238 502 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 ZP3P21754 424 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 S100GP29377 79 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 RND3P61587 244 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 SP6Q3SY56 376 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 NECAP1Q8NC96 275 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 TERB2Q8NHR7 220 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 CCDC140Q96MF4 163 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 QTRT1Q9BXR0 403 aaKnown RBP13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 OR51B2Q9Y5P1 312 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 V9GYH0 126 aa13.44□□□□□ -0.26
RHBDD3-207ENST00000496342 IGLV11-55A0A075B6I3 123 aa13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 ANKRD20A5PA0PJZ0 165 aa13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 MFSD2BA6NFX1 497 aa13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 GSTZ1O43708 216 aaPredicted RBP13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 LY86O95711 162 aa13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 HLA-AP01891 365 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms